| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4450 |
|---|
| Symbol | |
|---|
| ID | 8022138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 1089123 |
|---|
| End bp | 1090160 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644833224 |
|---|
| Product | putative KfrA protein |
|---|
| Protein accession | YP_002984364 |
|---|
| Protein GI | 241666005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.266051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.158271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTG ACCCCGCATC CACCGCCGAA GACCAAGCGC TGCAGGCCGA TATCGCGGCG
CTGCGCGGCC GTTTCACCGA GACGCGGGAG CTGTACCGCG AAGTCTGCGC GCTGCTGTTT
TTCCGCTATG GCGTCACACC GACGGCCAAC AAGCTCTACA GTCTGGTGCG CAAGGGCAGC
ATGAGCACAC CTTCCCACGT GCTGAACCGG TTCTGGCAGG ACCTGCGCGA CAAAACACGG
GTGACGATCG ACCACCCAGA TCTCCCCGAG GCCTTGAAGC AGGTTGCCGC CGAGGCAGTG
TTGGCCATCT GGCAAGCGGC CTCGTCCGCG GCGGCCACCG AACTGGCCGC ACTGCGGGCC
GAAGCGCGCC ACCAGGCGCA CGCCGCCGAA GCCGCGCGCG ACCAAGCCAC TGCGGAAAGC
GAAACCGCGC GACAAGCGAC CGCGGTCATT CAGGCACAGC TGGACTCGGT GCGCGGGCAG
CTTGCCGCGC TTCAAGAAAT GCTGTCTGCT GAGCGCCAGG GCCACGCAGC AACCGAAGCG
CGTCTGCAGG AGACCCGCCG GCAGTTGGAC GAGGCGGCAC AGCAGCTCAC ACAGGCTCGG
GTTGAATTTG GCGCGCAGCT CGATCGTGAG CGGGCCCGCG CGGATGCAGC AGAAGAGCGT
GCCGCCAGCC ACGAGAAACG TGCGTTGCGC GAGATCGACC AGGAGCGCAC CGCCCGTCAG
AAAAGCGACA AGCTGGCCGA TGAGCTACGT GCGCAGGTTG TGGCCGCGCG TACCGCGATG
CAAGAAAGCG CCGTGACACA TGCCAATGCG ATCGGCACGT TGCGCATGGA ACTGGGCGCA
GTGCGGCAGC AGGCGGAGGG AGCCGCCACG CGGCAGCGTG AAACGGCCGA AGAACTGGTG
CAGACCCAGT CGTTGCTGGA GGAGGCGCTA CGGCGGGCTG AGCGCGCCGA AACCGAAGCG
GAAACAACGC GCCGGCTGGT GAGCGAGTTG AAGAAGGCAA CACCAGGACG CGTTGGCCAG
CGGACGAAAG CGCCGTGA
|
|---|
| Protein sequence | MTLDPASTAE DQALQADIAA LRGRFTETRE LYREVCALLF FRYGVTPTAN KLYSLVRKGS
MSTPSHVLNR FWQDLRDKTR VTIDHPDLPE ALKQVAAEAV LAIWQAASSA AATELAALRA
EARHQAHAAE AARDQATAES ETARQATAVI QAQLDSVRGQ LAALQEMLSA ERQGHAATEA
RLQETRRQLD EAAQQLTQAR VEFGAQLDRE RARADAAEER AASHEKRALR EIDQERTARQ
KSDKLADELR AQVVAARTAM QESAVTHANA IGTLRMELGA VRQQAEGAAT RQRETAEELV
QTQSLLEEAL RRAERAETEA ETTRRLVSEL KKATPGRVGQ RTKAP
|
|---|
| |