Gene Rpic12D_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4448 
Symbol 
ID8022136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1087863 
End bp1088126 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content70% 
IMG OID644833222 
Producttranscriptional regulator, CopG family 
Protein accessionYP_002984362 
Protein GI241666003 
COG category[K] Transcription 
COG ID[COG3905] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00107538 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.141055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG CCGAAACCCG CGTATTGACC GCACATGTCC CAGTGCCGCT GGCCGAGAAG 
GTGGACCAGT TGGCCGACCG CCTCGAACGC TCGCGCGGCT GGATCATGAA ACAGGCACTG
TCGGCCTGGA TCGCCCAGGA AGAGGAGCGC GACCGCCTCA CCCGCGAGGC GCTGGCCGAC
GTGGACGCCG GCCGCGTCAT TGGCCACCAG GCCGTGCAGG CCTGGGCGGA CAGCCTGGGT
GCCGGTGAGC CGGTGCCGCG CTGA
 
Protein sequence
MSKAETRVLT AHVPVPLAEK VDQLADRLER SRGWIMKQAL SAWIAQEEER DRLTREALAD 
VDAGRVIGHQ AVQAWADSLG AGEPVPR