Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4448 |
Symbol | |
ID | 8022136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1087863 |
End bp | 1088126 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644833222 |
Product | transcriptional regulator, CopG family |
Protein accession | YP_002984362 |
Protein GI | 241666003 |
COG category | [K] Transcription |
COG ID | [COG3905] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00107538 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.141055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAG CCGAAACCCG CGTATTGACC GCACATGTCC CAGTGCCGCT GGCCGAGAAG GTGGACCAGT TGGCCGACCG CCTCGAACGC TCGCGCGGCT GGATCATGAA ACAGGCACTG TCGGCCTGGA TCGCCCAGGA AGAGGAGCGC GACCGCCTCA CCCGCGAGGC GCTGGCCGAC GTGGACGCCG GCCGCGTCAT TGGCCACCAG GCCGTGCAGG CCTGGGCGGA CAGCCTGGGT GCCGGTGAGC CGGTGCCGCG CTGA
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Protein sequence | MSKAETRVLT AHVPVPLAEK VDQLADRLER SRGWIMKQAL SAWIAQEEER DRLTREALAD VDAGRVIGHQ AVQAWADSLG AGEPVPR
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