| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4443 |
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| Symbol | |
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| ID | 8022131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 1082211 |
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| End bp | 1085210 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644833217 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_002984357 |
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| Protein GI | 241665998 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.597289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.3426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG TCGAGCGCAC TGCCTACCCG CGTTTCCCAA AGGTCTTCTC CACGAAAGAG
CTGCAGGCCT GCTACACGCC GACCGCTGAG GAGTTGGACT GGGCAACCCG CTCGACCCGC
GGCCAGAGTC CGCGCCTAGG TCTCTTGGTG CTGCTCAAGA TCTTCCAGCA ACTGCACTAT
TTCCCCTATC TTGATGCGAT TCCCACCGCC GTAGTCGATC ACGTGCGAGT TTGCGCGGGG
TTGGACCCCG ATACGCCGTT CGGTTACGAC CGCAAAGTCT CTCCCACGCT GTTCCGGCAT
TACGTCGTCG TGCGGCAATT CCTCGGCGTG CAACCCTACA TTGGCACCGA CGCCAATGAG
GTCACCATCC GCGCTGCACG TGAAGCGGCC GAGACGATGG ATCAGCCGGT GGACATTATC
AACGCGACTA TTGATGCGCT GATCTTGCAG CAGGTTGAAC TGCCTGCGTT CTCAACGCTC
GACACCATCG TCGAGCAAAT CCATGCCCGC ACCCAAAACG CAATGTTCAG GCGGGTCGCA
CGCCGGCTCT CTGAAGAGGA TCGGCAGCGC CTGGACAAGC TTCTCACGCG CGAATTCGCC
AACCGGCAGA CCGCCTACAA CAACATCAAG CGACATGCCC GGCGGCCCTC GCGCAAACAC
CTGAACCTGC TGATCGAGCA TCTGGAGTGG TTGGATTCTT TTGGCGACCT ATCCGGCGTC
CTGGAAGGCG TGCCTGCCAC CAAGCTACGT TCGCTGGCCA ACCAGGCCAT GGGCCTGGAC
GCAGCCAACC TCAAGGAAAC GCTGCCTGAG AAGCGCTATA CGTTGATCGT GGCCTTGCTT
GCTCACATGC GCGTGCGCAG TCGCGACGAT CTCGCCGAAA TGTTTATCCG GCGTATGGGC
GCGATCCACA AGCGGGCCCA GGACGAACTG GAATACATCC AGTCTCGCCA GCGCGCCAAG
CTCGAAGGCC TTGTCACCGT GCTGGACGGT GTCGTCGATA TCGTCGCCGA TGGCGGTGAC
GATGCCCGAA TCGGCGCGCA GGTGCGCAAG CTGTTGGCTC CCAATGGCGA CCTGGAGCCC
CTGCGCGAGC GCTGCGCCGA AGTGCGGGCT TTCAGCGGCA ACAACTATCT GCCGCTGTTG
TGGCGGCACT TCCGCGCCCA CCGTTCGGTG ATGTTGCGCC TCGCCCGCGT GTTGGAGTGG
GAGTCGACCA GCCAATCACG CACGTTGTTA GCCGGGCTGG AGGTCGCGCT GGAAAACGAA
TCACTGCACC GGGAGTGGAT CGCTGCTGAA GTCGATCTCA GTTTTGCCTC CGAGCGCTGG
CGCAAGCTGG TCCGGCGAGC GCACCACGAG GGTCCGCCCA CCAACCGGCG CTACTTGGAG
TTGTGCGTGC TGTCCCACAT GGTCAACGAG TTGCGCTCGG GTGATCTGTG CGTGGTGGGG
TCAGACGCCT TTGCCGACTA CCGGGGCCAC CTGTTGCCGT GGCGCGAGTG CGAGCGGCGC
TTGCCAGAGT ACTGCGCCAA GCTGGATCTG CCGGCCAACG CGCAGGAGTT CGTCGCGCAC
CTCAAGCAGT GGCTGGCCGA CGCCGCGCAG ACGCTGGACA AAAGTTTTCC GGACAAGCGC
CAGCACGTCA CCATCAGCGC TGACGGCGAA CCCTTACTCA AGCGCACCGC TGCGCGCGAA
ACTCCGCCCT CGGCCGTTGC CTTGCAGCAG GCGCTGATCC GCCGCATGCC GACGCGCAAC
CTGCTCGACG TGCTGGCCAA TATCGAGCAC TGGACCCAGT TCACCCGGCA CTTCGGGCCG
CTCTCCGGCA ACGATCCTAA GATCCGCAAC GCCGCCGAAC GCTATCTGCT GACGATCTTC
GCGATGGGTT GCAATCTCGG ACCCACTCAA GCTGCGCGCC ATATGGGCGA TCGCGTCACC
CCCCATATGA TGTCGTTCGT CAACCGGCGG CACATGAGCC TGGAGAAGCT GGAGACCGCG
CAGCGCGAGC TGATCGAGCT GTACCTGCGC CTGGATTTGC CTAAACACTG GGGCGACGGC
AAAACGGTGG CCGCCGACGG TACCCAATAC GACTTCTACG ACAACAATCT GCTGGCCGGC
TATCATTTTC GTTACCACAA GATGGGCGCC GTGGCTTACC GGCATGTGGC CGACAATTAC
ATCGCGGTGT TTCGGCACTT CATCCCGCCT GGTGTGTGGG AAGCCATCTA TGTCATCGAA
GGGCTGCTCA AGGCCAACCT GAGCGTCGAG GCCGACACCG TGCACGCCGA CACGCAGGGG
CAGTCGGCGG CGGTCTTCGC TTTCACCCAC TTGCTTGGCA TCAATCTGAT GCCCCGCATT
CGCAACTGGA AGGAACTGGA TCTGTACAAG CCCGATGCCG GCGTCAAATA CAAGCACATC
GATTCGTTGT TCTCGGCGGT GGTCGACTGG GATCTGATCG CTTTTCACTG GCAGGACCTG
ATGCAGGTGG CGCTGTCGAT CCAGGCCGGC ACCATCTCTT CGCCGCTGCT GCTGCGCAGA
TTGGGCTCGG AGAGCCGCAA GAACCGCCTC TACCTGGCCG CGCGAGAACT GGGCAACGTC
GTGCGCACCG TGTACCTGCT CGAATGGGTC GGCAGTCGCG AGCTGCGCCA GGAAGTGACC
GCCACCACCA ACAAGATCGA GTCGTACAAC GGCTTTGCGA AGTGGTTCTC GTTCGGTGGT
GACGTGATCG CGGAAAACGA GCCCGAGGAG CAGCAGAAAC GCCTGCGCTA CAACGACCTG
ATCGCCTCGG CCGTGATCCT CCAGAACACC GCAGACCTGA TGCAGGCCCT ACGCACGATG
GTCAGCGAGG GCATCAAAGT GAACGTCGCC GACATCGAAT TCCTGAGTCC TTATCTGACC
CACAACATCA AGCGCTTTGG TGACTACAAG CTGCACCTAG AGCGCGTACC GGAGGCCTGG
ATTCGCGATG GGTTGTTCGC GGGACCCGCC CGCGCTGTCC GCAGGGCTCG CCATGCCTGA
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| Protein sequence | MATVERTAYP RFPKVFSTKE LQACYTPTAE ELDWATRSTR GQSPRLGLLV LLKIFQQLHY
FPYLDAIPTA VVDHVRVCAG LDPDTPFGYD RKVSPTLFRH YVVVRQFLGV QPYIGTDANE
VTIRAAREAA ETMDQPVDII NATIDALILQ QVELPAFSTL DTIVEQIHAR TQNAMFRRVA
RRLSEEDRQR LDKLLTREFA NRQTAYNNIK RHARRPSRKH LNLLIEHLEW LDSFGDLSGV
LEGVPATKLR SLANQAMGLD AANLKETLPE KRYTLIVALL AHMRVRSRDD LAEMFIRRMG
AIHKRAQDEL EYIQSRQRAK LEGLVTVLDG VVDIVADGGD DARIGAQVRK LLAPNGDLEP
LRERCAEVRA FSGNNYLPLL WRHFRAHRSV MLRLARVLEW ESTSQSRTLL AGLEVALENE
SLHREWIAAE VDLSFASERW RKLVRRAHHE GPPTNRRYLE LCVLSHMVNE LRSGDLCVVG
SDAFADYRGH LLPWRECERR LPEYCAKLDL PANAQEFVAH LKQWLADAAQ TLDKSFPDKR
QHVTISADGE PLLKRTAARE TPPSAVALQQ ALIRRMPTRN LLDVLANIEH WTQFTRHFGP
LSGNDPKIRN AAERYLLTIF AMGCNLGPTQ AARHMGDRVT PHMMSFVNRR HMSLEKLETA
QRELIELYLR LDLPKHWGDG KTVAADGTQY DFYDNNLLAG YHFRYHKMGA VAYRHVADNY
IAVFRHFIPP GVWEAIYVIE GLLKANLSVE ADTVHADTQG QSAAVFAFTH LLGINLMPRI
RNWKELDLYK PDAGVKYKHI DSLFSAVVDW DLIAFHWQDL MQVALSIQAG TISSPLLLRR
LGSESRKNRL YLAARELGNV VRTVYLLEWV GSRELRQEVT ATTNKIESYN GFAKWFSFGG
DVIAENEPEE QQKRLRYNDL IASAVILQNT ADLMQALRTM VSEGIKVNVA DIEFLSPYLT
HNIKRFGDYK LHLERVPEAW IRDGLFAGPA RAVRRARHA
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