Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4439 |
Symbol | |
ID | 8022127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1077811 |
End bp | 1079172 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644833213 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_002984353 |
Protein GI | 241665994 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.505198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.839002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGA ATCTTGAGCG TGGTAAAGAG CGAGCCGACC TGGGGAAGTA TCGGGCGCTG GGCGGGTGGG TTGAAAAGCC CGACGACATG CAGCATGCGC TCGAGGGTAA CGTCAGCGCG GATGTGGTGA TTGCCGGTGC CGGTTTTGCA GGCCTTTCCG CGGCGCTGGA GCTCACCAGG CTGGGCGCGA ACGTCGTTGT GATTGAGCGG GATTTCGCCG GCTTTGGTGC CAGCGGGCGC AACGCAGGCT ATCTGGCCGG CGCCATGGCG CTCGAATACG ATCTCATGTT CAGGGGCCTC AGCAAGGAGC GGGCGACGCA GATCGTCCGC TACTACGACG ACGCTGTCGG CTTCGTGGAA GACAAGCTCA AGGAACACGA TATCGACTGC GAGTACGTGC AGTCCGGGTG GATTCGGGCG GGTGTCCATC CGTCGCAGGA AAAGAAGATC CGCGCCGATA TGCTGGTCGG TACCGAACAC GGCCACAAGT CGGAATTTCT CGATCACGCG CAAATGCGCG CACGCGGGAT TCCACCGGCG TTTCTGTTTG GTGAATACAC GCCGGCCGGA GGAACGCTCC ACCCGGGCAA ATACGTCATG GGGCTGCGGC GTGCCGCGCT GCGGGCTCGC GTGAAGCTCT ACGAGAACAC GCCGCTGCTG TCTTACACCG AAGGGCCGGT CATTCAGGTG AAGACTCCGC GCGGTAGCGT CAGCGCCCCG GTGCTGTTGC TGGCCACCAA TGCCTACACC CCGCAGCTCG GTTTGCTTGC AAACAAGGTC GTGCCATTGC GGATCTCGGC AATTGAGACC GAATCGCTGT CCGCAGTGCA GTTGGCCTCG CTGGATTGGC CAAGGCGCGA AGGCATCGTG ACGGGCCACT ACAGCATGGA GAGCTTCCGG CTGACGGCAC GTAACACAAT CATCTCCACC GTCAAGCGCA TCCACTATCC GTACGGATCA GAAACGCCGA ACGTGCCCGC CTACGACCAG TATCGAGCGC TGAGAGCAAA CCTCCATGAG CGTTTGCCCA CCTTGAAGGA CGTCGCATTG CGGCATTGCT GGAGCGGCTA CATCAGCACC GCCGGCAACG CGCTTCCCGT GGTCGGCACC ACCGGCGCAA ACCAGAACAT CTACTACACC GCCGGGTGTT CTGGCCATGG CCTGGCCAGT CAATCCATGC TCGGGAACAT GCTCGCCCAG AAGATTCGCG GGTCCGAGCC GCCGCTGCTG GCAGCGTTGC GCTACGACAC GCCCACGCTG CCGCCAGAGC CGTTCCGCTG GTGTCTCGTC AATGGGGCTC TGGCTGCGGC AAACACATTG GACGATCGAT TGAACCGCAA GCTGCGGCAC GCGGCAGCCT GA
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Protein sequence | MSTNLERGKE RADLGKYRAL GGWVEKPDDM QHALEGNVSA DVVIAGAGFA GLSAALELTR LGANVVVIER DFAGFGASGR NAGYLAGAMA LEYDLMFRGL SKERATQIVR YYDDAVGFVE DKLKEHDIDC EYVQSGWIRA GVHPSQEKKI RADMLVGTEH GHKSEFLDHA QMRARGIPPA FLFGEYTPAG GTLHPGKYVM GLRRAALRAR VKLYENTPLL SYTEGPVIQV KTPRGSVSAP VLLLATNAYT PQLGLLANKV VPLRISAIET ESLSAVQLAS LDWPRREGIV TGHYSMESFR LTARNTIIST VKRIHYPYGS ETPNVPAYDQ YRALRANLHE RLPTLKDVAL RHCWSGYIST AGNALPVVGT TGANQNIYYT AGCSGHGLAS QSMLGNMLAQ KIRGSEPPLL AALRYDTPTL PPEPFRWCLV NGALAAANTL DDRLNRKLRH AAA
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