Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4437 |
Symbol | |
ID | 8022125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1074652 |
End bp | 1075482 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644833211 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_002984351 |
Protein GI | 241665992 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.11505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTGA CAGAGCAGAT GAAGCTGGAG CTGGCGCGCG ATGGCGCCAC CGTCGCCCGA GGCCTGTTTT CACCCGAACG TCTCAAGCGG ATGCGCGAGG CGTTCGATTA CGGGATTGCC CACCCCAGCC CGCAGCACGG CTACGCCTTT GCAGGTACGC CGGATGAGCA TTTCAACGAC TACGGCAACT TCGACAACCG CGATGTACAC GTCGCGACGG TCAAGGCGTT GGGACTCGAT GAGTTTGTAG CGTCGCTCTG GGATTCCGAG CATGTGTGGT TCATCGGCGA GGAACTCTTC ATCAAGAAGG GCGGCAGGGC CGGCCGATCG CCGTGGCACC AGGACACTTC GTACTATCCG TTCAGCGGGC CGCAGTTGCT CAACATCTGG ACCTGCTTTG AGAAGATTCC CCGCAAGAAT GCGCTGGAGG TCGTACGAGG CTCTCACCTT GGGGCGCAGT ACAACGGTAC CTCTTACAAC GATCCCAACG ATCACACCAA GTCGCTGTGG GTCAACACCG ATTGGCCTCT ACTGCCCAAC ATTGAAGCCG ACCGTGCAAG AGACCCAGCG TCGTGGGACG TTGTCTCGTG GGATCTGGAA CCGGGCGATG CGCTGTTGTT CCACTCGGGC TCGCTGCACG GCGGTGCGCC CGTGACCCCG GATTGCCCGG ATCGCCATAC GCTGGTTTAC CGGTTCTACG GCGACAAGCT GTTTTACCGG CCCCTGCCAA CCGGAGGATG CAACTACGGC TACGACATCA GCAATCTCAA CGATCCGTCG CTGACGCCAG GCGAGCCGTT CCGGGCGCCT TACTGCACGC AGGTGCGGTG A
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Protein sequence | MQVTEQMKLE LARDGATVAR GLFSPERLKR MREAFDYGIA HPSPQHGYAF AGTPDEHFND YGNFDNRDVH VATVKALGLD EFVASLWDSE HVWFIGEELF IKKGGRAGRS PWHQDTSYYP FSGPQLLNIW TCFEKIPRKN ALEVVRGSHL GAQYNGTSYN DPNDHTKSLW VNTDWPLLPN IEADRARDPA SWDVVSWDLE PGDALLFHSG SLHGGAPVTP DCPDRHTLVY RFYGDKLFYR PLPTGGCNYG YDISNLNDPS LTPGEPFRAP YCTQVR
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