Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4434 |
Symbol | |
ID | 8022122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1069321 |
End bp | 1071156 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644833208 |
Product | protein of unknown function DUF1302 |
Protein accession | YP_002984348 |
Protein GI | 241665989 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0662376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.365948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA AGAAGATGTC CACGCGGACA GCGATTTCGC TCGCCGTGTT GGCGGCAACA ACGTCTGCAG CGTACGCCTA CGACTTCACC CTGGGCACGG ACGACGCGGT GAAAGGCTCG CTGGTGAGCA ACATCACGGC CGGTGTGGCA ACGCGGACAA AAAGCCCGAG CTGCGCGCTC ACGGGTGATC CGAATGCAAA TGGCTGCGGT GCGGCGGCCA ATACCGACCA GTGGGGCGCT GGCGACAACG GCGATCTGAA CTATCGCAAG TGGAAGCCCT ACAGCACATA CCTGAGCGCG ACCAGCGAAC TGCTGCTGAC GATGCCCAGC GAGGGGTTGA AGTTCATGGC GCGCGGCACG GGCATGTACG ACTTCATGGC CAAGAACACC GAGCGCACGC CGCTGTCGAG TGATGCGAGG GCGCAGGTGG TTTATGACGC GCACGTGCTT GACCTATGGG CGCAGAAGGA CTTTACCGTG GCGGATCAGA ACGCCCACGT CCGTATCGGC AACCAGGTCA TCAACTGGGG CGAGAGCATG TATGCCATGG GCGGCATCAA TGCCACCAAC TCGCTCGATA TCCAGAAGCT TCTGATTCCT GGCTCGCAGC TCAAGCAGGC GCTGCTACCT GCGCCGATGG TGAGCTTTGC CACGAATCTC TCGCATGGCT TGAGCACCGA GGCTTATTAC CAGTTCATCT GGAACGGCAA CCGCATGCCC CCGGTTGGCT CTTTCTGGTC GGCGTCCAAC GCTGTGGGCC GTGGTGCTGA GCCTTTCACC GTGAACACGA CCAATTTCAA CGCGAACGGC CCGAGCGCGG GTACGGTGGC GGGCCAGAAC GGTTTGAACA GCCACGACCC GGGCACCATT GCGGCGATCA ACAACGGCCT GGTCAATGGC GACTTCGCTG GCCCACCGTC GTTCTCGATC GGGCTGCCGG TCTCCAACAA GCTGCCTTCA AAGTACAAGC CGCAGTTCGG GGTGAAGTTC AACTATGTGC CGACCTCCAT CGACGCGAAC TTCGCCTTCT ATTACGAGAA CTACACCGAC AAGTCGCCCG TGTTGAGTTC GTTCACGAAT AACACAGCAC AGTGGTCGTA TCAGCAGAAT CGTCAGCTGT TTGGTATCAG CGCGAACTTC CCGGTGGGAC CGTGGGCAGT CGGTACCGAG CTGTCGTATC GCCCGCGTGA CGCCGTGGCG CTCTCGGGTT GCTACGGCGC AGGCGGACCG ATGGACCTGA ACGTGAACCC GGCCGGTGTC GACTGCCAGC AGTGGGTGGA CCGCAAGAAG CTGCAATTCG GTATCAACGG CATTCTGGCA CTCACGCGCA GCGAGTATCC GTTCCTCAAG ATGATAGGAG CGGATTCGGC CTCGCTGACC GCAGAAGCGA CGATGGTCTA CTACCCCGGT CTTGGCGGAA GCGTGACACG CACCATCAAC GGCGTGCAGG TCATGCAGGC GCCGCAGGCA GGCTATCTGA CGTGGCTGAA CAACAACTCA GGCACGGGCT ACCCCATCGG CATGCGCCAG GGTACGGCCG CCTCGGGCGG CGTGACGGTC GACTTCAACT GGACGTATGA CGGCACGCTG ATCCCCGGCT GGCAGGTCAC GCCGGGTGTG ACGTTCAACG CGGGCCTGTA CGGTTACACG CCCACCTTTA ACGCGAACTA CATGCAGGGC GCGAAGTCGG CCAACTTCTA CGTGCTGTTC AACCAGAACC CCACCGTCTG GCAGGCGGGC ATCAACTTCA CGGCGTTCTG GGGCGGGCAC AACACGGTCG GCAATCCGTA TTCGGATCGC AACTTTATCG GCGCATTCGT CACGCGCAAC TTCTGA
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Protein sequence | MNTKKMSTRT AISLAVLAAT TSAAYAYDFT LGTDDAVKGS LVSNITAGVA TRTKSPSCAL TGDPNANGCG AAANTDQWGA GDNGDLNYRK WKPYSTYLSA TSELLLTMPS EGLKFMARGT GMYDFMAKNT ERTPLSSDAR AQVVYDAHVL DLWAQKDFTV ADQNAHVRIG NQVINWGESM YAMGGINATN SLDIQKLLIP GSQLKQALLP APMVSFATNL SHGLSTEAYY QFIWNGNRMP PVGSFWSASN AVGRGAEPFT VNTTNFNANG PSAGTVAGQN GLNSHDPGTI AAINNGLVNG DFAGPPSFSI GLPVSNKLPS KYKPQFGVKF NYVPTSIDAN FAFYYENYTD KSPVLSSFTN NTAQWSYQQN RQLFGISANF PVGPWAVGTE LSYRPRDAVA LSGCYGAGGP MDLNVNPAGV DCQQWVDRKK LQFGINGILA LTRSEYPFLK MIGADSASLT AEATMVYYPG LGGSVTRTIN GVQVMQAPQA GYLTWLNNNS GTGYPIGMRQ GTAASGGVTV DFNWTYDGTL IPGWQVTPGV TFNAGLYGYT PTFNANYMQG AKSANFYVLF NQNPTVWQAG INFTAFWGGH NTVGNPYSDR NFIGAFVTRN F
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