| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4428 |
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| Symbol | |
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| ID | 8022116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 1061391 |
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| End bp | 1062890 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644833202 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_002984342 |
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| Protein GI | 241665983 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.111659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.480153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCA ACGTAATGAA CCACGACACC CAAGCTACTG CAGCGCTCCA GGCCCGCCTG
CGCGACCCTT CATTACTGGA AACGCGCGCC TGGTTGGCCT CGGGATGGCA AGAGGCGTCC
GACGGACGCT CGTTTGCGGT GACCAATCCC GCCACGGGCG AGATTCTGGC CCGCGTGGCC
AGTTTGAGCG GTGCCGAAGT TGAGTCTGCA ATCACGGCCT CCGCACAAGC GCAGGCCGTT
TGGCAGCGCC GCAGCAGCCA CGAGCGGGCC AAGCTGTTGC GTGCCTGGTT CGATCTGATG
ATTGCCAACG CCGATGACCT AGCCCTGATC ATGACCTCGG AGCAGGGCAA GCCGCTGGCC
GAAGCGCGCG GCGAGATCCT TTACGCGGCG TCGTTTGTTG AGTGGTTCGC GGAAGAGGCC
AAGCGCATCT ACGGTGACGT CGCATCGCAT CCGCAGACCG ACAAGCGGAT CCTCGTCATT
CGCCAGCCGG TCGGCGTGTG CGCGGCCATC ACGCCGTGGA ATTTCCCGGC GGCGATGATC
ACCCGCAAGG TGGCGCCAGC CCTCGCTGCG GGCTGCTCGA TTATCGTGCG GCCGGCCGAC
CTGACGCCGC TGACCGCGCT TGCACTGGCG GTGCTGGCCG AGCGTGCGGG CATTCCTGCC
GGGGTGCTTC AAATCGTGTG TGGCCCATCG CGCGAGATCG GCGCGGTCCT GACGGCCAGC
CCGGTCGTGC GCAAACTGTC CTTCACAGGC TCGACCGAGG TTGGCCGGGT GCTGATGAGC
CAGTCGTCGC CGACGATCAA GCGGATGTCG CTCGAGCTGG GCGGCAACGC GCCGTTCATC
GTGTTCGACG ATGCCGATCT CGATGCCGCC ATCGAAGGTG CGATGGCGTC GAAGTACCGC
AACAGCGGCC AGACGTGCGT ATGCGCCAAC CGCTTTCTGG TGCAGGACGG CATCCACGAT
CGCTTCGTCG AGGCGCTGGT GCGCCGCGTG GCGGAGCTCA AGGTCGGCAA TGGCGTGGAG
CCAGGCGTGC AGCAGGGGCC GCTGATTCAG CAGTCAGCGT GCGAACACCT GCAAGCCATG
ATCGACGATG CCGTCGGCAA GGGCGCGAGG GTTGTCGTTG GAGGCAAGGG CCATGCATTG
GGTGGCACGT TCTTCGAGCC GACCGTGATT GCCGGCGCCA CGCCGGACAT GCGCGTGGCG
CGCGAGGAAC TGTTCGGTCC GGTCGCGCCT GTGTTCCGCT TCCGCGATGA GGCAGAGGCG
ATTGCTATGG CCAATGACAC CGAGTACGGC CTTGCCGCCT ATCTCTACAC CCGCGACAAC
GCGCGCATCT GGCGGGTTGG TGAAGCGCTG GAGTACGGCA TGGTGGGCCT GAACACCGGT
CTGATTTCCA ACGAGGTGGC CCCGTTCGGC GGCGTGAAGC AATCCGGTCT CGGCCGTGAA
GGCTCGCGAT ACGGCATCGA CGAATACCTG GAAATCAAGT ACCTGTGCGC ACAGGTCTGA
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| Protein sequence | MQFNVMNHDT QATAALQARL RDPSLLETRA WLASGWQEAS DGRSFAVTNP ATGEILARVA
SLSGAEVESA ITASAQAQAV WQRRSSHERA KLLRAWFDLM IANADDLALI MTSEQGKPLA
EARGEILYAA SFVEWFAEEA KRIYGDVASH PQTDKRILVI RQPVGVCAAI TPWNFPAAMI
TRKVAPALAA GCSIIVRPAD LTPLTALALA VLAERAGIPA GVLQIVCGPS REIGAVLTAS
PVVRKLSFTG STEVGRVLMS QSSPTIKRMS LELGGNAPFI VFDDADLDAA IEGAMASKYR
NSGQTCVCAN RFLVQDGIHD RFVEALVRRV AELKVGNGVE PGVQQGPLIQ QSACEHLQAM
IDDAVGKGAR VVVGGKGHAL GGTFFEPTVI AGATPDMRVA REELFGPVAP VFRFRDEAEA
IAMANDTEYG LAAYLYTRDN ARIWRVGEAL EYGMVGLNTG LISNEVAPFG GVKQSGLGRE
GSRYGIDEYL EIKYLCAQV
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