| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4421 |
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| Symbol | |
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| ID | 8022109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1053708 |
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| End bp | 1055105 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644833195 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_002984335 |
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| Protein GI | 241665976 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.111124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG AACCGACCGC CACGCCCTTC AGCACCCTAG CGCTCGCCCC GGCTGTGCTC
GCGAACCTTG CGCAGCTAGG CTATACCGAC ATGACGCCGA TCCAGGCCGC AAGCCTGCCG
ATCGCCCTTG CCGGCCACGA TCTGATCGCG CAGGCAAAAA CGGGCAGCGG CAAAACCGCT
GCGTTTGCGC TGGCCCTGCT CGCACGGCTC GACGCGCGCA GCTTCGACGT GCAGGCGATG
GTGCTGTGCC CTACGCGCGA ACTTGCCGAT CAGGTGGCGC AGGAGATCCG CCGCCTGGCC
CGTGCCGAAG AAAACGTGAA GGTGCTGACG CTGTGCGGCG GCACACCGAT GCGCCCGCAG
GCCGCAAGCC TGGAGCACGG CGCCCACGTC ATCGTCGGCA CGCCGGGCCG CATCATGGAC
CATCTGGAGC GCGGCAATCT CGCGCTCGGT GCACTGAAGA CGCTGGTGCT GGACGAAGCA
GACCGCATGC TCGACATGGG TTTCTTCGAT GACATTGCGA CGGTCGTGCG CCAATGCCCG
GCCGACCGGC AAACGCTGCT GTTCTCGGCG ACGTACCCGG AAGGTATTGC AAAGCTGAGC
CAGCGGATTC TGCGCAACCC GAAGGAAGTG AAGCTCGAAG AGCGCCACGA CGACAGCAAG
ATCCGCCAGC GCTTCTACGA GGTGACCGAC AGCCAGCGGC TGCATGCGGT GGGGCAACTG
CTCAAGCACT ACCGTCCGGT CAGCACGCTC GCGTTCTGCA ACACGAAGCA GCAATGCCGA
GACCTGCTCG ACGTGTTGCG CGCGCAGGGC ATTCACGCGC TTGCGCTGCA TGGCGAACTC
GAACAGCGTG AGCGCGACCA GGTGTTGATC CAGTTCGCGA ACCGCAGTTG CTCAGTGCTG
GTTGCGACCG ACGTTGCCGC GCGAGGGCTC GATATCGCCC AGCTTGAAGC GGTGATCAAC
GTTGACGTGA CGCCCGATCC CGAAGTGCAC GTGCACCGGA TTGGCCGCAC AGGCCGCGCC
GATGAGAACG GCTGGGCGCT GAGCCTCGCC AGCATGGATG AGATGGGCCG CGTCGGCAAT
ATCGAAGAGG CGATGGGCCG CGAGGTCGAA TGGCACCAGC TCGACGAGCT GGATACCGGC
AATGACGCAC CACTGCTGCC GCCAATGGAA ACGCTGCAGA TTCTCGGCGG CCGCAAGGAG
AAGATCCGCC CCGGCGATGT GCTGGGTGCG CTGACCGGCG ATGCGGGTTT TCGCGGCGAC
CAGATCGGCA AGATCAACGT GACCGAATTC TCGACGTACG TTGCGGTCGA ACGCGGCATC
GCGCGCGACG CGCTGCGCAA GCTCAACGCC GGCACGTTGA AGGGCAAGAA GGTCAGGGTT
CGGCTGATGG ATGAATGA
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| Protein sequence | MTLEPTATPF STLALAPAVL ANLAQLGYTD MTPIQAASLP IALAGHDLIA QAKTGSGKTA
AFALALLARL DARSFDVQAM VLCPTRELAD QVAQEIRRLA RAEENVKVLT LCGGTPMRPQ
AASLEHGAHV IVGTPGRIMD HLERGNLALG ALKTLVLDEA DRMLDMGFFD DIATVVRQCP
ADRQTLLFSA TYPEGIAKLS QRILRNPKEV KLEERHDDSK IRQRFYEVTD SQRLHAVGQL
LKHYRPVSTL AFCNTKQQCR DLLDVLRAQG IHALALHGEL EQRERDQVLI QFANRSCSVL
VATDVAARGL DIAQLEAVIN VDVTPDPEVH VHRIGRTGRA DENGWALSLA SMDEMGRVGN
IEEAMGREVE WHQLDELDTG NDAPLLPPME TLQILGGRKE KIRPGDVLGA LTGDAGFRGD
QIGKINVTEF STYVAVERGI ARDALRKLNA GTLKGKKVRV RLMDE
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