Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4414 |
Symbol | |
ID | 8022102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1044496 |
End bp | 1045263 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644833188 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002984328 |
Protein GI | 241665969 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGG AACCGCTGAA CCGGCGCGAC TGGATTGCCG GGCTGGAAAA AGGGCTCGCG ATCCTGGAGG CATTCGACCA CGAGCACCCG CGGTTGACGC CCACCCAGGC CGCCGAGTTG ACCGGCCTTA CCCGCACAGC CGCGCGCCGT TACCTGCTGA CGCTTGAACA CCTGGGCTAC CTCACCAGCG AAGGCACGCT GTTCAGTCTG ACGCCGCGTG TGCTGAAGGT CGGCTGGTCG TACTTCGATT CGGCGCGCCT GCCGCGCACG GTGCAGCCGT TCCTGCAGCA GGTGACCGCC GCCGTGGGCG AGGTGGCATA CCTCAGCGTG CTGGATGATT GGGAGCTCGT TTTCATTTCG CGCACCAGCA CCAGTCGGGT CATGAGCACG GGATTCGTCC TGGGTGCACG CGTGCCCGCC CCGCTCGCGT CGGCCGGTGT GATGATGCTG GCCGCGCAAC CCGAGCAGAA GGTCAAGGCA TGGCTGGAAA CCTGTGTGCT GACGCCGTAC ACGCCTTACA CGATCCTGCA GCGGGACCGC CTGTTCGATG AAATCCGCAA GGCCGGCAGG CAGGACTACG CCGTGGTCGA ACAGCAGTTG CAGATTGGCG TGCGGGGCGT GGCCGTGCCG TTGCGTGACC GGCACGGCAA CGTGATCGCC GCGCTGAGCG TGAACATGCA GGTCGGTGAA GAAACCACCG AGCACGCCTT GCAGCGGGTA CTGCAGGTGC TGCAGGACAC CGCCCTTTCG ATCATGCGCG TGCTGTAG
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Protein sequence | MTKEPLNRRD WIAGLEKGLA ILEAFDHEHP RLTPTQAAEL TGLTRTAARR YLLTLEHLGY LTSEGTLFSL TPRVLKVGWS YFDSARLPRT VQPFLQQVTA AVGEVAYLSV LDDWELVFIS RTSTSRVMST GFVLGARVPA PLASAGVMML AAQPEQKVKA WLETCVLTPY TPYTILQRDR LFDEIRKAGR QDYAVVEQQL QIGVRGVAVP LRDRHGNVIA ALSVNMQVGE ETTEHALQRV LQVLQDTALS IMRVL
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