| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4412 |
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| Symbol | |
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| ID | 8022100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1042026 |
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| End bp | 1042859 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644833186 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_002984326 |
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| Protein GI | 241665967 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.855071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTG GAAAAACCAC CCTCATCGCC CACATCGGCT ACCCGACCGA GACGTTCAAG
TCGCCGATGA TCTACAACCC CTGGTTCGAG CAAAAAGGCA TCGATGCCGT TGTGATGCCC
ATGGGGGTCA AGGCAGAGGA TTACCCGCAG AGCTTCGCGT CGATCTGCCG TTTCACCAAC
CTGCGGGGCG CGCTGATCAC CATGCCGCAC AAGGTCACCA CGGTGGAGTT GGTCGATGAA
GTCACGCCGG CGGTGCGCAT TGCCGGCGCC TGCAATGCGG TGCTCAAGCG CGATGACGGC
ACGTTGCTGG GCGACCAGTT CGACGGCGCC GGCTTCGTGC GCGGCGTGCT GCGCAAGGGG
CGCCAGCTGG AAGGCGCGCG CGTGCTGCTC TCGGGCGCCG GCGGTGTCGG CTCGGCGATT
GCCGCGTCGC TGGCGGCGGC CGGTGTGGGC GAGTTGGCCC TGTACGACAC GCGCGCAGAA
TCCGCCGAAT CGCTCGGCCG ACGTCTACTC GAGCACTACC CCGCGCTTGC GGTGGGTACC
GGATCGAATG ATCCGGATGG CTTCGATGTG GTCGTCAACG CCACACCTGT CGGTATGAAG
GACGATGATC CTCTGCCCTT CGACGCCGCC CGCATCGCAC CGAGCTGCTT CGTCGGCGAG
GTCGTCATGA AATCCGAGTA CACGCCGCTG CTGCGCGCGG CGCTCGACAA GGGTTGCGAT
GTCCAGGTCG GCACCGACAT GCTGTTCGAG ATGATTCCCG CGTACCTGGA GTTCTTCGGC
TTCGGCACCG CCACCGCAGA TGAGCTGCGG CGCAGCGCTG CCATTGCCTA CTGA
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| Protein sequence | MISGKTTLIA HIGYPTETFK SPMIYNPWFE QKGIDAVVMP MGVKAEDYPQ SFASICRFTN
LRGALITMPH KVTTVELVDE VTPAVRIAGA CNAVLKRDDG TLLGDQFDGA GFVRGVLRKG
RQLEGARVLL SGAGGVGSAI AASLAAAGVG ELALYDTRAE SAESLGRRLL EHYPALAVGT
GSNDPDGFDV VVNATPVGMK DDDPLPFDAA RIAPSCFVGE VVMKSEYTPL LRAALDKGCD
VQVGTDMLFE MIPAYLEFFG FGTATADELR RSAAIAY
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