Gene Rpic12D_4401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4401 
Symbol 
ID8022089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1032004 
End bp1032870 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID644833176 
Producthypothetical protein 
Protein accessionYP_002984316 
Protein GI241665957 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCG CTCTGCCAAC CTGCGCCGGC GCAGGCCTGC GCGCGCCGCA CTTTCCTGCC 
CTGCTGCACG GGGAAGCCCG CTTCCCGTGG GCAGAAGTGC ACAGCGAGAA CTATCTGTAT
GGCGGCCCCG CACGTGCAGC GCTGCTGGCC GCGCGAGCGC ACCAGCCGGT GAGCCTGCAC
GGCGTGGGCA TGGGGCTTGG CAATGCGGAT GGACTGGATG TCGAACACGT ACGCGCCATC
GCCATGCTTG CCGATGCCGT AGCGCCGGCC GCCATTTCCG AGCACCTGTG CTTCAACCGC
AGCGGCGCGC AGGTCGTCAA CGATCTTTTG CCGCTGCCCT ATTCCCGCGA ATCGCTCGAT
ATCGTCTGCG CCAACGTCAT GCGGGCACAG GACATTCTCA AGCAGCCGCT GCTGATCGAG
AACATTGCCG CGTACATCGA CTGCCGCACG CTGGTCGATG CCGACGAGGC CATCTCCGAA
GGCGCATTCC TGACCGCCCT CGCCCGACGC ACGGGCTGCG GCATCCTGCT GGACCTAAAC
AATCTGTACG TGAACAGCGT CAACCATGGC GTGACAGTCG AATCCGTACT CACCGATATC
GACCCAGCGC TGGTCGGCGA AATTCACCTG GCGGGCTTCA GCGTGGAAGA CGGCATGCTG
ATCGACACGC ATAGCGCGCC GGTCCATGCG CCCGTCTGGG CGTTGTACAA CGCGTGGGTT
GCCAAGCACG GCGCACGCCC GACACTGATC GAATGGGACG CTGAACTGCC GCCCGTGCAG
GTGTTGCTGG ACGAGGCGGC ACGTGCCCAG GCGGTACTGA ATCGCCACAC CAACGCCATG
CAGGAGACAC GCCATGCGAC TGCCTGA
 
Protein sequence
MQTALPTCAG AGLRAPHFPA LLHGEARFPW AEVHSENYLY GGPARAALLA ARAHQPVSLH 
GVGMGLGNAD GLDVEHVRAI AMLADAVAPA AISEHLCFNR SGAQVVNDLL PLPYSRESLD
IVCANVMRAQ DILKQPLLIE NIAAYIDCRT LVDADEAISE GAFLTALARR TGCGILLDLN
NLYVNSVNHG VTVESVLTDI DPALVGEIHL AGFSVEDGML IDTHSAPVHA PVWALYNAWV
AKHGARPTLI EWDAELPPVQ VLLDEAARAQ AVLNRHTNAM QETRHATA