| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4395 |
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| Symbol | |
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| ID | 8022083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 1027847 |
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| End bp | 1029100 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644833170 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002984310 |
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| Protein GI | 241665951 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0762591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.909511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCC CGACCATGCC GCCGATCCAG CCATCCGTGC CGGGCGTGAC GGGTGCTGGC
TTCAACCTGG TCGAACTGTT GCAGGAGCTG AAAGGCAACA ACCCGCAATT GATCCAGGGG
CGCCACACCT ACCTGTCAGC CAAGTCGATA CCGCCGCAGC TTGCGTCGCC CAACAACCCG
CAGCTCGGCT ATATCTGGAA CAGCATCCCG AAGGGATTCC CGCTGGCGGT GAACCGCGCG
GGCGGCAGCC AGTACAACCT GACGCAGCAG ATTCCGTTTC CGGGCAAGAA AGCGCTGGCG
GCCGAGATTG CCGATCGCCA GGCTGAGTCC CTGAACGCGC AAAACGACGC GCTGTACCTG
CAGCTCTATG CGCAGCTTTC CACCACGTAC TACCAGGCGA TTGCGCTGCA AAAGCAGATC
GACGTGCAAA AGCTGACCAT CACGCGCCTG GAGCAGGTCA AGCAGATCAC GCGTGTGCGC
TACGCCAACA ACGCCGCCGC CTACGCAGAC TTCCTCAACG CGCAGGTCAT GCAGAGCAGC
GCGCAGAACG ACCTGTTTGC CGCTCAGCGC CAGTACGACA GCACGCTGCA GACGCTCAAC
ACGCTCATCG GGAAAGATCC GAGCTTCCCG CTCGTGCTGC GCGCAGACGA CGAGGCTGTC
CACCTGCCGG AAGAACCGCT GCCCGAACTG GAAAACCAGG CGCTGCGCGA GCACCCGTCG
ATCAAGGCAT CGGCCGAGCT GATGGACGCG GCACGCAAGA GCGTGACGCT GGCGCGCAAG
GCCTACCTGC CCGACTTCCA GGTCATTGCC ACCGTCACGA CGGACAACCC GCCGTATGGC
GTGCGCCCGA ACAGCTACCA GATCGAGCTG GACGTGATCA TCCCGTTCTG GTTCCTGACC
AAAGAGAAGT ACGGCGTGAA CCAGGCGGTG GAAAGCCAGA TTGCCACCGA GGCGAACGAC
GTGTCGGTGC GCCAGCAGAC GTTACTGGCC GTCGATACCG CCTACAACAC GCTGCGCCAG
ACGCTTGCGC AGCTCGACTT CAACAAGCAG CGGCAACTGC CGCAGGCGCT GGCGGCCTAT
CGCGTCACGA TGACCAACTA CGCCAGCAAC AACGCCGATT TCAACGACCT GCTTACCGCC
CAGGGCGCGC TCAAAAACGC CGAACTGGCG GTCGCGCAGG CGCAGGCCAC GGCCTTGCAG
GCCTATCACG CGCTGCTCGC GGCCACCGGC CGCTCGCCGG TTCAAGCTCA ATAA
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| Protein sequence | MPVPTMPPIQ PSVPGVTGAG FNLVELLQEL KGNNPQLIQG RHTYLSAKSI PPQLASPNNP
QLGYIWNSIP KGFPLAVNRA GGSQYNLTQQ IPFPGKKALA AEIADRQAES LNAQNDALYL
QLYAQLSTTY YQAIALQKQI DVQKLTITRL EQVKQITRVR YANNAAAYAD FLNAQVMQSS
AQNDLFAAQR QYDSTLQTLN TLIGKDPSFP LVLRADDEAV HLPEEPLPEL ENQALREHPS
IKASAELMDA ARKSVTLARK AYLPDFQVIA TVTTDNPPYG VRPNSYQIEL DVIIPFWFLT
KEKYGVNQAV ESQIATEAND VSVRQQTLLA VDTAYNTLRQ TLAQLDFNKQ RQLPQALAAY
RVTMTNYASN NADFNDLLTA QGALKNAELA VAQAQATALQ AYHALLAATG RSPVQAQ
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