Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4381 |
Symbol | |
ID | 8022069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 1009376 |
End bp | 1010119 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644833156 |
Product | acetoacetate decarboxylase |
Protein accession | YP_002984296 |
Protein GI | 241665937 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4689] Acetoacetate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.602468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.211813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTA AGACCGTCCG CGAAACCGCC TTCGCGATGC CGCTCACGAG CCCCGCCTAC CCACCCGGCC CGTACCGCTT CATCCACCGC GAATTCTTCA TCATCACGTA CCGCACCGAC CCGGCCAAGC TGCGCGCCAT GGTGCCGGAA CCGCTGGAAG TGCCCGAACC GCTGGTCGCC TACGAGTTCA TCCGCATGGC CGACTCCACC GGCTTTGGCG ATTACACCGA AAGCGGCCAG GTCATCCCGG TCACCTACGA AGGCAAGCCC GGCACGTACA CGCTGGCGAT GTACCTGGAC GACCATCCGC CCCTGGCCGG CGGCCGTGAA ATGTGGGGCT TTCCCAAGAA GTTGGCAAGC CCGAAGCTGG TGACCGACAA GGACACGCTG ATCGGCACGC TCGACTACGG CCCCGTGCGC GTGGCCACCG GCACCATGGG TTACAAGCAC CGCGAGCTGG ATCTGGCCGA GCAGAAACGC CGCCTGGAGC GCCCGAACTT CCTGCTCAAG ATCATTCCGC ACGTGGACGG CAAGACGGCG CGCATCTGCG AGCTGTCGCG CAACCTCATG ATCGACATCG ACATGAAAGG CGCCTGGACG GGCCCCGCGT CGCTGGAACT GGCGCACCAT GCACTGGCGC CCGTGGCCGA ACTGCCCGTG CTGGAGATTG TCGAAGCCCG GCACATCATT GCGGACCTGA CCCTTGGCAT GGGCGAGGTT GTATTCGATT ACTTGGCGCA GTAG
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Protein sequence | MDIKTVRETA FAMPLTSPAY PPGPYRFIHR EFFIITYRTD PAKLRAMVPE PLEVPEPLVA YEFIRMADST GFGDYTESGQ VIPVTYEGKP GTYTLAMYLD DHPPLAGGRE MWGFPKKLAS PKLVTDKDTL IGTLDYGPVR VATGTMGYKH RELDLAEQKR RLERPNFLLK IIPHVDGKTA RICELSRNLM IDIDMKGAWT GPASLELAHH ALAPVAELPV LEIVEARHII ADLTLGMGEV VFDYLAQ
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