Gene Rpic12D_4374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4374 
Symbol 
ID8022062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp999874 
End bp1000416 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content59% 
IMG OID644833149 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002984289 
Protein GI241665930 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.206818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATCG AAAAATCCCG CGACCTTTGC CTGCGCCCGC TCGAGCGCAA TGACCTGCGT 
TTCGTGCACG AGCTGAACAA CGACGCGAAG ATCATGCGTT ACTGGTTCGA AGAACCGTAC
GAAACCTTCA CCGAACTCTC GCAACTCTAC GACCGCCACG TGCACGATCA GCGCGAGCGC
CGCTTCATCT GCGAGAACAA TGCCGGCGAA GCCGTGGGTC TGGTCGAATT GATGGAGCTG
AACTACATCC ACCGCCGCGG CGAATTCCAG ATCATCATCG CGCCCGGCTG GCAGGGTCAC
GGCTATGCGT CAACCGCGAC GCGACTGGCC GTCGACTATG CATTCATGGT GCTGAATCTG
CACAAGCTGT ACTTGGTCGT CGACGTGGTG AACGAACGCG CGATCCACGT ATACGAGAAA
TGCGGCTTCC AGCGCGAAGG CGAGCTGATC GAGGAGTTCT TCAGCAACGG CGCGTATCAC
AACGCCTTGC GCATGTGCGT GTTCCAGCGC GACTACGTGA AGACGATCCG CAACGCCAAC
TGA
 
Protein sequence
MVIEKSRDLC LRPLERNDLR FVHELNNDAK IMRYWFEEPY ETFTELSQLY DRHVHDQRER 
RFICENNAGE AVGLVELMEL NYIHRRGEFQ IIIAPGWQGH GYASTATRLA VDYAFMVLNL
HKLYLVVDVV NERAIHVYEK CGFQREGELI EEFFSNGAYH NALRMCVFQR DYVKTIRNAN