Gene Rpic12D_4371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4371 
Symbol 
ID8022059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp997520 
End bp997864 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content66% 
IMG OID644833146 
ProductAntibiotic biosynthesis monooxygenase 
Protein accessionYP_002984286 
Protein GI241665927 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.54507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG TCATCTTTGA AGTCGAGCCC GCACCGGGCC AGCGCGACAC CTACCTCAAC 
CTGGCCGCAC GGCTGAAACC GCTGCTCGAG CAGGTCGACG GCTTCATCTC GGTGGAGCGT
TTCCAGAGCA TCACGAACCC GGACAAGATG CTCTCGCTGT CGTTCTTTCG CGATGAAGAG
GCCGTCAAGG CCTGGCGCAA CATGGAGCAG CACCGCGGCG CGCAGCACGT CGGCCGCGAC
CACGCGTTTG CGGACTACCG CCTGCGCATC GCCCACGTGG TGCGCGACTA CGGCATGACC
GAGCGCGACG AAGCCCCCAC CGACAGCCGC GCCGAGCACG CCTGA
 
Protein sequence
MIAVIFEVEP APGQRDTYLN LAARLKPLLE QVDGFISVER FQSITNPDKM LSLSFFRDEE 
AVKAWRNMEQ HRGAQHVGRD HAFADYRLRI AHVVRDYGMT ERDEAPTDSR AEHA