| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4366 |
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| Symbol | |
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| ID | 8022054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 990007 |
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| End bp | 991422 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644833141 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002984281 |
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| Protein GI | 241665922 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.505198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.659948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG ATCGCTGGGC GTACGAAACG CTTGAGATTT TTGTCTGGGA AGGCCGTCAC
GACATTGCCG ATCGTGTGGC GCGGTTCATG GCGCCGTTCG GGGCAGAGGT GATCCGCGCG
GGCGGCATCG ACTTTCAGCC GGCCGAGCCT CGGCTCAAGC CCGCGGTGGC GGTGATCAGC
GCCTCGGTGG TGGAAAGCGG CGGCTTTACG GTGCTCGACT GGCAGGCCGC GCAAGGCATG
CCGGTAATCT GGGTGGCCTC GGACGCGCAG CATGATTCGA GCCGCTTCCC GCCCGAATAC
ACGCACGTGC TCGGGCCGGA CTTTGGCGCG ACTGAACTGC GCGCGCAGAT CAGCAAGGTC
TTGCCGTCGA TGTCGTCGGC GCAGGCCCAG GCGCAGGATC AGAGCGACCT CGTGGCGGCG
TCGCCGGCCA TGCACGGGCT GCTGGAGCAG GTCGATACCT TTGCCGATTG CGACAGCAAC
GTCATGCTTT ACGGCGAAAC CGGCGCCGGC AAGGAACGTA TTGCGCGCTT GCTGCATGAC
AAGAACAGTG TCTATGGCAA GGGCCCGTTC GTGGCGGTCA ACTGTGGCGC GATTCCCGAC
GGGCTGTTCG AATCCCAATT TTTTGGCCAT GCCAAGGGCG CGTTCACGGG CGCCATGTAT
GCGCACCGCG GCTACTTTGA ACAAGCGAAC GGCGGCACGC TGTTTCTCGA CGAGCTGGGC
GATCTGCCGC TGTATCAGCA GGTGAAGCTG TTGCGCGTGC TGGAAGACAG CGAATGCACG
CGGCTGGGCT CGACGGTGCC GGTCAAGCTG GATTTCCGCC TGGTGGCCGC TACCAACAAG
AATCTGCGCG AGATGGTCGC CACGGGCAAA TTCCGCGCCG ATCTGTACTT CCGCCTGGCG
GTGATCGAGC TGCGCATCCC GAGCCTGGAG CAGCGCGGCG CGGATGACAA GATCGCGCTG
CTGCTTTCCT TCCTGCGGCA TTTGCTGGGC GACAAAACGT TTGATGCCAT GCCGCCGGTG
CCCGAATGGG TGCGGGCATC GGTCGGGCGG GCCTACTTTG CCGGCAATGT GCGCGAACTG
CGCAACCTGG CCGAGCGCAT CGGCATCACC CTGCGCCAGT TCGGCCGCTG GGACGAGGCC
CGCATCCTGC CGCTGTTTGC CGGCCTGCAG CGCGATGCGT TCGAGCGCGA GGCGGGAAAT
GGTGGCAATG GCGGGTATGG CGATCGCGGT GGGGGTGGAA GTGGTGGCAA TGGCGGCGAA
GAAGAGCGCC GCCGTATCCT CGCGGCGCTG GACGCCAACA ACTGGCGCCG CCAGGACACC
GCCGCCACAC TCGGCATCAG CCGTAAGGTT TTGTGGGAAA AGATGCGCAA ATACCAGATC
GCCGACGGCG AAACCGAGCT TCGCGAGCTG GAGTGA
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| Protein sequence | MKTDRWAYET LEIFVWEGRH DIADRVARFM APFGAEVIRA GGIDFQPAEP RLKPAVAVIS
ASVVESGGFT VLDWQAAQGM PVIWVASDAQ HDSSRFPPEY THVLGPDFGA TELRAQISKV
LPSMSSAQAQ AQDQSDLVAA SPAMHGLLEQ VDTFADCDSN VMLYGETGAG KERIARLLHD
KNSVYGKGPF VAVNCGAIPD GLFESQFFGH AKGAFTGAMY AHRGYFEQAN GGTLFLDELG
DLPLYQQVKL LRVLEDSECT RLGSTVPVKL DFRLVAATNK NLREMVATGK FRADLYFRLA
VIELRIPSLE QRGADDKIAL LLSFLRHLLG DKTFDAMPPV PEWVRASVGR AYFAGNVREL
RNLAERIGIT LRQFGRWDEA RILPLFAGLQ RDAFEREAGN GGNGGYGDRG GGGSGGNGGE
EERRRILAAL DANNWRRQDT AATLGISRKV LWEKMRKYQI ADGETELREL E
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