Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4365 |
Symbol | |
ID | 8022053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 988333 |
End bp | 989991 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644833140 |
Product | hypothetical protein |
Protein accession | YP_002984280 |
Protein GI | 241665921 |
COG category | [S] Function unknown |
COG ID | [COG4655] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.878571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.937445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCA CCTTTATCGC CACGGTTGGT CTGGCGGTGC TGGTGTCGAT CGACATCGGC AACCTGTTCT ATACGCAGCG CGCGTTGCAG CGTTCCGCCG ACCTCGCAGC CATGGCGGCC GCACAGCGGC TGGATTTGCC TGCCGCCGCA CAGCAGGCGG TGATACAGAA CGGGCTGACG GTGGATGGCA CCAACGTCAC GCTGGCCGTC GTGCCGGGCG TATGGGATGC CAGTGCGGGG ACTGCTCCGA CGTACTTCAC CGCGCAAGCC GCAGTGGATG GAAATACGAA CGCCGCGCAG GTGACGATCA CGCAGAACGT GCCGTATTTC TTCATGGTCG GTCAGCGGAG GTTGCAGGCG ACTGCGATTG CGAAGAACAC GTCCATCGTG GCGTTCTCCC TGGGGTCCGG GTTGGCTTCT GTCGATAACG GACTGCTGAA CCAGCTGCTC GGATATTTGC TTCACACGAA TCTGAATATC GATGCTGTTT CCTATCAGGG GCTGGCCACA ACCAACATCC GGCTCGCCGA TCTTGCCGTG GCGCTGGGGG CGGGGTCGAT GCAGCAATTG CTTTCGCTGT CACCCAGCCT CGGGAGCCTT TTCAATGCCG TCATCTCAGT GGCATCGCAG TCAGGGCTGG CTGGGGTGTC GGTGGGTGGG GCAGGCGCCA GCAATGCGTT GTCATTTGGC AGCGATCTGA ATGTGCCGAT CAATATTGGC GATGGTGGAG CCTCTTCGCC GGGCTTGCTG CAGGTGCTGG CGCTGGCCGG TAATGAACAG GCTGCGCTCA ATGCCACCGT CAACGTGCTC GATCTTCTGA CAACGGCTGC GCAGATTGCG AATAGTCAGT CGGCTGTGAA TGTGGCGCCT GTGAAGCTAA ATCTGCTGGG TCTCGGCGCG GTCACGTTGT CGTTGAAGAT CATTGAGCCA CCGGCGATTG CTGTTGGGCC GCCGGGGCAA TTTTTGTCGG GTCCGAGCGC CGGGCAATGG AAGACCCAGG CGCGGACGGC TCAGGTGCGT TTGGGCGTGG GGGTGCTGGT TGGCGCGCCG GGGGTCCTTG CTGTGAGTGT GCCTATTGGC CTGCAAGTCG CGGCAGCGCA AGCCCATGCG AAGTCAAATA GCTGCACTGT TCCTCGTGCC AGCTCATCAG CCACGATTTC CGCACAGCCC CAGCCCGTGT CGATATGTAT CGCGACCGAT GCAGATAAGG CGGTCAATGG TTCAATGGAT TGCGCAAGCG CATCTCCCGC GGGTTTGGTT GATTTGGGGC CCCTCGGGGC CGTGAGTATT AAAGCCAACG TGTCGCCAAT CGCAAACTCC AATTGGGGCG ACGAAACCAT TGCCGCAACG CAGATCGGCC TGAATCCTCA AACGGATACC AGCGGTAAGT CTCCGCCACG CGTTGCGACG CAGGCCGTCT TCAGTTCCAT CTTGAACAGC AATCTGAATC AGCTCCAACT AACGGTGACT CTCCCGCTCG GAGGAACCGT TCAATTGGGT TCTGATCTTG CACCCGTCAT AGCGCCGGTG TTGGCGTTGG TCGGGACGAC CCTGGATGCC GTTCTCAGCC CACTGCTCGG GGTTCTCGGC ATCCAACTCG GCTACGCCGA CATCAAACTC CTCTCGCTCG ACTGCGACGC CGTCGAGCTG GTTTACTGA
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Protein sequence | MTATFIATVG LAVLVSIDIG NLFYTQRALQ RSADLAAMAA AQRLDLPAAA QQAVIQNGLT VDGTNVTLAV VPGVWDASAG TAPTYFTAQA AVDGNTNAAQ VTITQNVPYF FMVGQRRLQA TAIAKNTSIV AFSLGSGLAS VDNGLLNQLL GYLLHTNLNI DAVSYQGLAT TNIRLADLAV ALGAGSMQQL LSLSPSLGSL FNAVISVASQ SGLAGVSVGG AGASNALSFG SDLNVPINIG DGGASSPGLL QVLALAGNEQ AALNATVNVL DLLTTAAQIA NSQSAVNVAP VKLNLLGLGA VTLSLKIIEP PAIAVGPPGQ FLSGPSAGQW KTQARTAQVR LGVGVLVGAP GVLAVSVPIG LQVAAAQAHA KSNSCTVPRA SSSATISAQP QPVSICIATD ADKAVNGSMD CASASPAGLV DLGPLGAVSI KANVSPIANS NWGDETIAAT QIGLNPQTDT SGKSPPRVAT QAVFSSILNS NLNQLQLTVT LPLGGTVQLG SDLAPVIAPV LALVGTTLDA VLSPLLGVLG IQLGYADIKL LSLDCDAVEL VY
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