Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4363 |
Symbol | |
ID | 8022051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 986992 |
End bp | 987915 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644833138 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002984278 |
Protein GI | 241665919 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.855071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCT TCCCAAACGC CGTGCGCGCC GCCCTGGCCG GCATGACCAT GCTGACCGTC ATGCTGGCTG GCTGCGGCTC GATGGCCACG TCCGACATGA GCCTGCGTGC CGATGCCGAC ATCGAGATGG CACGTCAGCG CCAGAGCCAG GAGAAGTCTG AGATCACCAG TCCGGCGACG TATCTTTCGT TGATCCGCAG GATGCAGGAG CAGGGCCTGT ACTACGCATC GCTTGCGCAT ATCGATGCCT ACCAGCAACG CTATGGCCGT GCACCCGAGA TCATGCTGCT GCGTGCGGAC GCATTGCGCG AAACCGATCA GCTTGCCGCT GCCGATGCCG AATACCGTGC GGTGGTGGGA GCAACGTCCG CCATGGGCGC AGGCACGCAA GGCGGATTGC TCAATGCCGC CGCATGGCGC GGTCTGGGCA TCATTGCGGG GCGCCAGGGC AACTTTACCG AGGCGGCTCG TCGGCTGCAG GTGGCAGCGC AGGCCAATCC TACCGACGCC AGCACAGCCA GCGATCTGGG CTACGCGCTG ATGCGTGCCG GCGAGGTCGA ACAAGCCCGC GTGCCGCTGA TGCAGGCGCA GCAGATGGCC GCTTCCAGCC CGAAGATCGC CGGCAACCTG GTGATCTGGT TGACCGTGAA TGACCGCAAG GACGATGCTG CGTCGCTCGC GTCGCACGCC CAGCTGACGG CATCCGCGCG CAAGGCCATT GACGAAGACG TGGCGCGCGT GCGGGGCGCT TGGCGCGATC GGCGTATCGG TCGCGACGCG GCGGCGGCTG CCACCCGTGC GGTGGCGCTC AGCCCATCTG CCGCAGGCGT AGCCGGGACG GCCACGCCCG CTATCACGAC CCAATCCCGT CCGCTGGCAT TGCAGCGCGG CCGCTTGCTT GACACCTTGG AGACCGCGCA ATGA
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Protein sequence | MTRFPNAVRA ALAGMTMLTV MLAGCGSMAT SDMSLRADAD IEMARQRQSQ EKSEITSPAT YLSLIRRMQE QGLYYASLAH IDAYQQRYGR APEIMLLRAD ALRETDQLAA ADAEYRAVVG ATSAMGAGTQ GGLLNAAAWR GLGIIAGRQG NFTEAARRLQ VAAQANPTDA STASDLGYAL MRAGEVEQAR VPLMQAQQMA ASSPKIAGNL VIWLTVNDRK DDAASLASHA QLTASARKAI DEDVARVRGA WRDRRIGRDA AAAATRAVAL SPSAAGVAGT ATPAITTQSR PLALQRGRLL DTLETAQ
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