| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4361 |
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| Symbol | |
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| ID | 8022049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 985065 |
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| End bp | 985991 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644833136 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002984276 |
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| Protein GI | 241665917 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.395481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGCA TGACGCTCTG GTTCGGTTGC CTCGCGCTGC TGCTGATGGG CGCATCGCTC
ATGCTGTGGG CGGAGGCCGT ACGCCGTCGC GAGCGCGAGG CATCGCGCAG CTTTGTGCGT
GCGCAGACCG AGCAGATCAA CGCGCGTTAT CAACCGAATG TGGAGCCCGT GCCGGCAAGC
GTGCCCGACT CGTTGAATCG CGCCTGGCAG GATGCACTGC GCCGCGCAGA TATCGAGCCG
AGCCGGCGCT TCTACGTGCT GCTGATTGGC CCCGCGCTCA TGATTACGCT CGCCGTCTGG
GCGGTGTCGA GCATGTTGTC TGCCCTGACG GCCCTCGCTC TGTACGTCGT GATCGTTGCT
TTCCTGTTCT GGAACCGGAC CCGAAAGATG AACGAGCGCC TGCTGCAGCA ATTGCCGGGC
TTTCTCGATG GCGTGGTGCG GCTGATGAGC ATCGGCAGCG CGGTGCCTGC GGCGTTTCAG
GCGGCCAGCG CCAACACCGA ACAGCCGCTG CGCAACTGCC TGACTGCCAT CACGCAGATG
CAGCGCGCCG GCAAGGACCT CGACGCCGCG GTGCTGACCG TCGGCCGGCA GTATCGCGTG
AACGAATTGA TCCTGCTGTC GTCGGTGCTG CGCCTTGCTT TGCGCTACGG CGGGCGGGCC
GACATCGTGA TGGAGCGCAC GGCTGCATTC ATGCGCGACC GGCAGCAAGC CCAGCGCGAG
CTGTTTGCGC TGTCGGCAGA GACGCGGTTA TCCGCATGGA TCATCGGGCT GCTGCCCGTC
GTGGTGGGCG GTGTCATCAT CATGTTCAAC GCGGCGTACA TCATGTCGAT GTGGCGCGAT
CCGTTCGGCA AGACGTTGAT TCTTACGGCC TTCGGTATGG AAGTGCTGGG TGCAGTCATG
CTGGCCAGGC TGGCGAAATC GGTCTGA
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| Protein sequence | MSSMTLWFGC LALLLMGASL MLWAEAVRRR EREASRSFVR AQTEQINARY QPNVEPVPAS
VPDSLNRAWQ DALRRADIEP SRRFYVLLIG PALMITLAVW AVSSMLSALT ALALYVVIVA
FLFWNRTRKM NERLLQQLPG FLDGVVRLMS IGSAVPAAFQ AASANTEQPL RNCLTAITQM
QRAGKDLDAA VLTVGRQYRV NELILLSSVL RLALRYGGRA DIVMERTAAF MRDRQQAQRE
LFALSAETRL SAWIIGLLPV VVGGVIIMFN AAYIMSMWRD PFGKTLILTA FGMEVLGAVM
LARLAKSV
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