Gene Rpic12D_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4356 
Symbol 
ID8022044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp979531 
End bp980034 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID644833131 
ProductTadE family protein 
Protein accessionYP_002984271 
Protein GI241665912 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACAT TGCAACGGGA ACGGGAGGGT GCTCGCATGC ACCCGGAAGT CCGCACGCAT 
GCTGTCCGCC GCCCCCGGCG GCACGGCGGC CGCGGCGCAG CTTCAGTCGA ATTCGCCATC
GTCGTGCCGG TGCTGCTGGT GCTCATGCTT GGCGTCGTGT ACTACGGCGT GATCCTCGCC
ATGCAGCAGG CGCTGACCCT GGCGGCGGAA GAGGGCGCAC GCGCGGCGCT CCGCTATCAG
CCTTCCAACA CGCAGCGTGT GGCAGCCGCC TATGCGGCCG TGACGTCAGT ACTTCCCACC
TTCCTGACCG GGCGGGTCCA GACCAATCAG AGCAGCACCC CGCTGGTGAA TTGCCAGAAC
GTGGCGGGCA TGCAATGCCT GAGCGTGGTC CTGACATTGC CCGTGACCTC CGGCAACAAC
CCGCTGCTGC CCTCGATACC GCTGTTGCCC GCACCGGCTA CGTTGACGGG CTCTGCCGTC
GTGCAGCTTG TGCCCGGCTC CTGA
 
Protein sequence
MPTLQREREG ARMHPEVRTH AVRRPRRHGG RGAASVEFAI VVPVLLVLML GVVYYGVILA 
MQQALTLAAE EGARAALRYQ PSNTQRVAAA YAAVTSVLPT FLTGRVQTNQ SSTPLVNCQN
VAGMQCLSVV LTLPVTSGNN PLLPSIPLLP APATLTGSAV VQLVPGS