Gene Rpic12D_4354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4354 
Symbol 
ID8022042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp978726 
End bp978905 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content56% 
IMG OID644833129 
ProductFlp/Fap pilin component 
Protein accessionYP_002984269 
Protein GI241665910 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG CCATTCTGAA GTTCATCCGT GACGAACAAG GTGCCACTGC CGTCGAGTAC 
GGCATGATCG CTGGTCTGAT CGCAGCGGCC ATCACGGTCA TCGTGGGCAA GCTGGGTACG
CAGCTCAACA CCGTCTTCAC CAATATCTGT ACAGCCGTCA AGGGCGGGAC TGCTTGCTAG
 
Protein sequence
MKNAILKFIR DEQGATAVEY GMIAGLIAAA ITVIVGKLGT QLNTVFTNIC TAVKGGTAC