Gene Rpic12D_4353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4353 
Symbol 
ID8022041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp977096 
End bp978160 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content70% 
IMG OID644833128 
Productputative hemagglutinin-related transmembrane protein 
Protein accessionYP_002984268 
Protein GI241665909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.637133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCGG CTTGCTCTTC GGGAGGCTCC GGCTCGGGCA GTTCGCCGAA TCCGAGCCCG 
AACGACACGA CGGGCGTGAC GCCCGTCGGC AAGGTCGCAA ACGGCACGGG CAACACCGTT
GTGGCGACTG GCCAGGCGGT CAGCAGCCTC GGCTCCACGC TTCAAAACGC AAACATTCCG
GGCTTGTCGG ATCAGGCCAA GGCCGGGCTG GGCGGCACGG TTGACAACGC CGGCAAGGCG
GTCAGCGATC TCGGTCTGGG CGTCCAAACC GGGCTTGGCA AGATGGGCCA GAACCCCAAT
CCGATCGGTA CAACGGTGGC CAGCACCGGC AATGTCGTGA CGGACCTGGG CCAGGCCACC
GTGAGCGCAG GCTCGCTCGT GCAAGGCCTC GGCCAAGGTT CTGGCGCACC GTTGGCACCG
ATCACTCAAC CGGTGGGCGG CGGCGTCCAG CAGATCGGCC AGGCGCTGAT TGGTGGCGGT
ACGCTGCTGG GCAGCGCGCT GTCTTCCGGC GCGGTGCAGC AGGTGACGCA GCAACTGAGC
ACGGCCATCG TGCCAGTCAC CACGCAGGTC AGCGGCGCTA CTCAGATGAT TGGCGATTCG
ACGGGCCTGG GCGGAGCCTT GAACAATCTG CTTGGGACCG TTGGCGGCGG CGTGGGCGGT
GCCGGCAACA CCATCACCGG GACGGGCGTA CCGGTGGTCT CGACCCTGGG CCCGGTGGTG
ACGTCGCTCG GGACGACTGT CGCAGCAATC GGCGGTGTCG CCACGACCGG CGGGTCGGCG
GGCAGCAACC CGCTGGGCGG CCTGCTCGGC GGCGTGGGGG GCAGCTCCGG CGGTACGACC
CCGCTGGCTC CGTTGACCGG CCTCCTGGGC GGCGCATCTG GCGGCTCCAG TCCCCTGGCG
CCTGTCACGG GCCTGCTGGG CGGCGCAGCC GGTGGCAGCA ATCCGCTGGC GCCCATCACC
AATCTGCTGA GCGGCGCGAC CAGCGCAGCC GGCGGCACAT CGGGCGGCAA TCCGCTGGCC
CCTGTCACTA ACTTGCTGGG CGGCGTTGGC AGCCCGGCGC ACTGA
 
Protein sequence
MLAACSSGGS GSGSSPNPSP NDTTGVTPVG KVANGTGNTV VATGQAVSSL GSTLQNANIP 
GLSDQAKAGL GGTVDNAGKA VSDLGLGVQT GLGKMGQNPN PIGTTVASTG NVVTDLGQAT
VSAGSLVQGL GQGSGAPLAP ITQPVGGGVQ QIGQALIGGG TLLGSALSSG AVQQVTQQLS
TAIVPVTTQV SGATQMIGDS TGLGGALNNL LGTVGGGVGG AGNTITGTGV PVVSTLGPVV
TSLGTTVAAI GGVATTGGSA GSNPLGGLLG GVGGSSGGTT PLAPLTGLLG GASGGSSPLA
PVTGLLGGAA GGSNPLAPIT NLLSGATSAA GGTSGGNPLA PVTNLLGGVG SPAH