Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4352 |
Symbol | |
ID | 8022040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 975072 |
End bp | 976547 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644833127 |
Product | putative hemagglutinin-related transmembrane protein |
Protein accession | YP_002984267 |
Protein GI | 241665908 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.869023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.852491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA ATATCAAGTG CCTGGCCGCC ACCATGGCAA GCCTGTTGGT TTTGGGTGGT TGCGCCAGCT CCGGCTCAGG AGACATGGGC AGCTCGCTGG GCGGCTCGAA CGGCGGCGGC TCGAACAACA ACGGCGGATC AACACCAACG CCTTCGCCCT CCCCGTCGCC TTCGCCGTCG CCTTCGCCCT CTCCTTCGCC TTCGCCGTCC CCCAGCCCGA CTCCGGCACC TGCGCCGCTG ACGCCGACCG GCGCCGTCCT CAACAATGCA GGGGGCATCG TCACGGCGGC CGGCTCGACT GTGAGCGGCC TCGGCAAGAC CATCGCCACC GCGCCGCTGC CCTCGCAGCT GAGTGGCGTG CAAAGCGGCT TGGGCGGTGT GGTTGAAAGC GCTGGCGCGA CGGTTTCGGC GCTGGGCACG GGCGTACAGA ACGGGTTGGG CAGCATCGGC CGCAACACCA ATCCGGTTGG CACCACCGTT TCCAGCCTCG GGAACGTGGT GACCGGTGCG GGCAACACGG TCACGAGCGC CGGCACGCTG GTCAACAACC TGGGCACCGG TCCGCTGGCG CCGCTGGCTC CAGTGACAAC ACCGCTGGCA GGCGTGGTCA CGCAAGTCGG CCAGGCTGTT GCCAACGGCG GCGGCACGCT GGGCACGGCC CTGTCGACCG GCCCGGTGGA GCAGCTCACG CAGCAACTGA GCACGGCCAT CGTGCCGCTG ACGTCGCAGA TCACCAGCGG CACACAGACG CTGGGCGCGG CCACGGGTCT GGGTTCCCCG GCAAACTCAC TGCTGGGCAC GATTGGCGGC GCGGTGGCCA ATGGCGGTAC GACCCTCACC GCTGCCAACG TTCCGGTTGT CAGTGGTCTC GGTGGCGTGG TGACGGCCGC AGGCACCACG GTTGCCGCGC TGGGCGGCGC TGTGTATTCG CCGACGGCCT CGGGCGGTAA TCCGCTGGCC CCGATCACAG GCCTGCTGGG CGGCCTGGGT GGCGCAACGG GCGGCAGCAA CCCGCTCGCT CCGATCACTG GCGCACTCGG TGGCCTCGGC GGCGCTGGTG GCACCAACCC GCTGGCGCCA ATTACAGGCT TGCTGGGCGG CCTGGGTGGC GCGACGGGCG GTAGCAACCC ACTTGCTCCG ATCACCGGTG CACTCGGTGG CCTCGGCGGC GCTGGTGGCA CCAACCCGGT GGCGCCGATT ACGGGCTTGC TGGGCGGCCT GGGTGGCACG CCAGGTGGTA GCAACCCGCT TGCTCCGATC ACCGGTGCGC TCGGTAGCCT GGGCGGTGCA GCCGGTGCTG CCAGCAACCC GCTGGGGCCC ATCAGTGCGA TCACGGCCCC GGTTGGCGGT GTGGTCACCA CGGTGGGCAC CGGCCTGACG TCAGCAGGTG CGGCAACACC GCTGTCTCCG GTCACCGGCG CGGTGGGTGG TCTGCTGGGT ACGGTGGGCA CCACACTAGG CGGCACGCGC CACTGA
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Protein sequence | MNKNIKCLAA TMASLLVLGG CASSGSGDMG SSLGGSNGGG SNNNGGSTPT PSPSPSPSPS PSPSPSPSPS PSPTPAPAPL TPTGAVLNNA GGIVTAAGST VSGLGKTIAT APLPSQLSGV QSGLGGVVES AGATVSALGT GVQNGLGSIG RNTNPVGTTV SSLGNVVTGA GNTVTSAGTL VNNLGTGPLA PLAPVTTPLA GVVTQVGQAV ANGGGTLGTA LSTGPVEQLT QQLSTAIVPL TSQITSGTQT LGAATGLGSP ANSLLGTIGG AVANGGTTLT AANVPVVSGL GGVVTAAGTT VAALGGAVYS PTASGGNPLA PITGLLGGLG GATGGSNPLA PITGALGGLG GAGGTNPLAP ITGLLGGLGG ATGGSNPLAP ITGALGGLGG AGGTNPVAPI TGLLGGLGGT PGGSNPLAPI TGALGSLGGA AGAASNPLGP ISAITAPVGG VVTTVGTGLT SAGAATPLSP VTGAVGGLLG TVGTTLGGTR H
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