| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4350 |
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| Symbol | |
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| ID | 8022038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 971735 |
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| End bp | 972988 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644833125 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_002984265 |
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| Protein GI | 241665906 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.626304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAGTT TTTCCAAAGA GTTGCCGATT ACCACAGAAG TCGCGCAGAA CAACAATAAT
CATGACAGCG ACGGCGGCAT CACGCCGCAA CACGCCGACA GCAAGGGATT GCACTCTGAG
CTGTCGCAAT ACGCACCGGG GGCCATCATG CTGCAACGTC TATCGGATGA CGCAGAATTC
CATCGACTCG TCGATACCAT CTACGAGGCG GTACTCGAGC CTGCGCAGAT GCCGATCGCC
CTGGCCCTGC TTTCTGTGTA TGCCGGCGCC GAAAGCGCAC ACTATTTCGT CTGGGACAAG
CACACCGACA CGCCGCGCCA CGGCGTTTCG TCGGGCTGGT GCCAGCACTG CCCGCAGCCG
GGCCACTGCA ACAGCTTCTG TCACGATCCG CAACTGCTGA GCGCCGCGCC GCCCGAAGAG
ACGCCTTCGG CAGGCATGAC ACTGATCGAT ACGCCCGACA TGCGCGTCAC GATGCGCCTG
CGCACGCGCG ACGACGATGC ATCGGAAGTC AGCACCATCG AACGCGAAAC CCGCCTGCAG
CGCGTGCTGC CGCACCTGCA GCGGGCTGCG CGCATGCAGC AGCGCAATCT TGAGCTGAAC
GAACTCGCCG CACTCGGCAT GGCCGGGCTG GATACGCTCG ACTTCGGCGT GATGGTCATC
GAGCGCACCA TGCGCGTGAA ATACGCCAAC GCCTGGGCGC GCACGATGAC GACGGAAGAC
GACCGCTTGT CGCTCGATGG CAGCCTGTTG CATTCGGCTG ATCACACACA CGACGCGGCG
CTTCGCAACC TCATCGAACA TGCTGCCGGG TCACTCGGCG TACAAGGCGC GGCCGGTTCG
TGGATGTACC TGGCGCGCGA TGGCCGCCCG GTACCGTTCA TTGCCACGCC GCTCACGCCT
TCCGATGCGA TGCGTTCGGC CTGGGCCTCG CCGCTGGCGC TGGTGCTCGT CGGCAACTCC
GAGGCACGGT CCGTCATGGA CGCCGGCGTG CTCGCCTCGC TCTTCGGGCT GACCAACAAG
GAATGCATCG TCGCTGCACG GCTGGCCGCA GGCGAAACCC TGCAGGAAAT TGCCGAGCGC
GAATTTCTCT CGCTGCACAC GGTGCGCGTG CATATCCGCG ACATCCTGCG CAAGACCGGC
ACGCATCGCC AGTCTGAGCT TGTGCGCCTG CTGCATCTGT TGCCCAGCGT CGATCTGGAA
CGTGCTGGCG CTGCCACTCC GGCTGCGCGC CGGCGGGGCC GCCTCAACGC CTGA
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| Protein sequence | MLSFSKELPI TTEVAQNNNN HDSDGGITPQ HADSKGLHSE LSQYAPGAIM LQRLSDDAEF
HRLVDTIYEA VLEPAQMPIA LALLSVYAGA ESAHYFVWDK HTDTPRHGVS SGWCQHCPQP
GHCNSFCHDP QLLSAAPPEE TPSAGMTLID TPDMRVTMRL RTRDDDASEV STIERETRLQ
RVLPHLQRAA RMQQRNLELN ELAALGMAGL DTLDFGVMVI ERTMRVKYAN AWARTMTTED
DRLSLDGSLL HSADHTHDAA LRNLIEHAAG SLGVQGAAGS WMYLARDGRP VPFIATPLTP
SDAMRSAWAS PLALVLVGNS EARSVMDAGV LASLFGLTNK ECIVAARLAA GETLQEIAER
EFLSLHTVRV HIRDILRKTG THRQSELVRL LHLLPSVDLE RAGAATPAAR RRGRLNA
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