Gene Rpic12D_4339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4339 
Symbol 
ID8022027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp957521 
End bp958297 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID644833114 
Productprotein of unknown function DUF82 
Protein accessionYP_002984254 
Protein GI241665895 
COG category[S] Function unknown 
COG ID[COG1656] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.172322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCG TCGTCCTCAC GTTCGATTCC AATCTGACGC CGCTTCTTCC GCAGGCGTTG 
CGCGGGCATC CCGTTGCACG CGCGTGGGCA GACGGCGCCA CGCTCAAGCA CGCTATCGAG
GCACTTGGCG TGCCGCATAC GGAAGTAGGG CAAGTCCTGG TGGACGGCCG GCCCATGGCG
CTGGAGGCCA TGTTGCCCGC CCGGGGCTAC ATTGCCGTTT CAGCGGTGGA GCCCCTGTTG
CCCACCGCGC CGCTGCACTT TCTGTGCGAC GCCCACCTGG GCGCAACGGC GCGCTTGCTG
CGCATGGCCG GCTTCGATAC CGCCTACGAC AACAACTACG CCGACGCGGC CATCGAAGCT
CTCGCGAACG GAGAAGACTG GATCGTGCTC TCGCGTGATC GTGAACTCCT CAAGCGACGG
GGCATCCGTC GTGGCGCGTT CATCCGTGCG CGTGAGCCGC AAGCGCAGAT GCGCGAAATC
GTCATGCGCC TCCGGCTGGC CGATGTGGCC AGGCCGTTCT CTCGCTGTCT CGAATGCAAT
GTGCCGTTGC GGATGCTGCG CCCGGAAGAG GCTTCCGCCA GCGTGCCGCC CCGCGTGCGT
GAGCGCCAGC GGCTCTTTAG CACCTGTGAT GTCTGCCGCC GCGTCTATTG GCCCGGTTCG
CACTGGGCGC GCATGAATGC CGTGTTGGCC GACATGCTTT CGCCCGAGGC CGACGCATCC
ACAGACACAG CAGAAGCTGC CGAGCGTATG CCGCGCACCG GCAGCGCGGG CGCCTGA
 
Protein sequence
MQTVVLTFDS NLTPLLPQAL RGHPVARAWA DGATLKHAIE ALGVPHTEVG QVLVDGRPMA 
LEAMLPARGY IAVSAVEPLL PTAPLHFLCD AHLGATARLL RMAGFDTAYD NNYADAAIEA
LANGEDWIVL SRDRELLKRR GIRRGAFIRA REPQAQMREI VMRLRLADVA RPFSRCLECN
VPLRMLRPEE ASASVPPRVR ERQRLFSTCD VCRRVYWPGS HWARMNAVLA DMLSPEADAS
TDTAEAAERM PRTGSAGA