| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4335 |
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| Symbol | |
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| ID | 8022023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 953215 |
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| End bp | 954525 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644833110 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002984250 |
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| Protein GI | 241665891 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.514202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.256174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT CCAAACGCAC ACTCGCCATT TCGGTTGCCG CCGTGCTCGG CGTTGCAGCT
GTGGGCACCT ACGGTCTGGT CTCCAGCGCC GGCGCATCGC AACAGCCGGC AGCCGCCCCC
GCCGCCACGC CGGTGGATGT GGCGCCGGTG CTGGCCAAGA ACGTTTCCGA ATGGGATGAA
TTTTCCGGCC GAATCGAAGC CGTTCAACGC GTAGAAGTCC GCCCACTGGT GAGCGGCACC
GTCACCGCCG TCCACTTCAA GGACGGCAGC ATCGTCAAGA AGGGCGACGC GCTGTTCACC
ATCGACCCGC GCCCCTACGC GGCGGAAGTG GCCCGCACGC AAGCCGCACT GACCGCCGCC
AAATCGCGCG TGGCCTACAC CACGTCGGAG CTGGACCGCG CGCAGAAGCT GGTGGCCGAC
AACGCCATCG CGCGGCGCGA GTTCGAAGAG AAGGAAAACG CCGCCCGCGA GGCCCAAGCC
AACCTGCAAG GCGCCGCCGC CGCGCTGGAA GCCGCCAGGC TGAACCTGGA GTACACGCAC
ATCGTGGCGC CGGTCGCGGG CCGCGTGTCG CGCGCAGAAA TCACCGTCGG CAACGTCGTC
TCGGCGGGGG GTGCTGCGCC GGTATTGACG ACGCTGGTGT CGGTCTCGCC GATGTACGTG
GCGTTCGATG CGGATGAACA AAGCTACCTG CGCTACTCCG CCAAGGCCGC CCAGGGCGCC
AAGACGCCGG TCTACATCGG GCTGGCCAAT GAAGACGGCT ACACGCGCGA AGGCGCCATC
CAGTCCGTCG ACAACCGGCT CGATGTGCGC TCGGGCACGA TCCGCGTGCG GGCCACGCTG
GACAACGCCG ACGGCCGCCT CACGCCGGGC CTCTACGCCC GCGTGCGCAT GAGCACCGGC
GCACCGCACG ACGCCATCCT CATCACCGAC AAGGCCATCG GTACGGACCA GGACAAGAAG
TTCGTCCTGG TGGTGGATGC GGCCAACAAG ACGAGCTATC GGCCGGTGGT GCTGGGCGCC
TCCATTGACG GCCTGCGCGT GGTGAAGTCG GGCCTGAAGG CGGGTGAACG GATCGTCGTC
AATGGCATCC AGCGCGTGCG CCCCGGCGAC GCCGTGGCAC CCAACACGGT GACCATGGAT
AGCCTGGTCA CCAAGCGCGT GGTGCTGCCC GGTGCACAAC CCGAAGCGCC CGCAGCACCG
GCCGAAGCCA AAGCCGACAC AACGACTGCA CCTGCTGCCA AGGCCGAGGC CAAGGCCGCC
AACGCCAAGA CCGCCGCTAC CGCGCAACGC CTGCCGGCCG ACCGCGCTTG A
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| Protein sequence | MSLSKRTLAI SVAAVLGVAA VGTYGLVSSA GASQQPAAAP AATPVDVAPV LAKNVSEWDE
FSGRIEAVQR VEVRPLVSGT VTAVHFKDGS IVKKGDALFT IDPRPYAAEV ARTQAALTAA
KSRVAYTTSE LDRAQKLVAD NAIARREFEE KENAAREAQA NLQGAAAALE AARLNLEYTH
IVAPVAGRVS RAEITVGNVV SAGGAAPVLT TLVSVSPMYV AFDADEQSYL RYSAKAAQGA
KTPVYIGLAN EDGYTREGAI QSVDNRLDVR SGTIRVRATL DNADGRLTPG LYARVRMSTG
APHDAILITD KAIGTDQDKK FVLVVDAANK TSYRPVVLGA SIDGLRVVKS GLKAGERIVV
NGIQRVRPGD AVAPNTVTMD SLVTKRVVLP GAQPEAPAAP AEAKADTTTA PAAKAEAKAA
NAKTAATAQR LPADRA
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