Gene Rpic12D_4324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4324 
Symbol 
ID8022012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp939472 
End bp940389 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID644833099 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002984239 
Protein GI241665880 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0282215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGCG CCCCCACGTC CCCATCGACC CAACCTGCTG ATCCTCGCGT AACCGCAGAC 
GCGAGCGTCT TCGGCACGCT TGCACGCGGC TCGCGCGCAT CGCTCGAGCG CGTCACCAAC
CTGGGCGATG GCGTGACCGC CGCCATCTGG CGCAACGAGC ACGACGAGGC CCGCTACATC
CAGCCCGGGC ACCACACGCT GTCGGTCTAT CTGCAAGGCG GCTACACGAC GCACCGGCAA
GATCTGCCGC ACCTGTTCGG CGCGCCGGGC CGCGTGTGCA TGCTGCCGGC CGAACACCAG
TCGAGCTGGG TGATCGAGCA ACCGATGCGC TTCGTTCATC TGTATTTCGC GCCCGACGCG
CTGGCCGGGC ACGCCGTGCG TCTGCTCGAC GCGGAGCCTC GCCTGTTCAC GCTGCACGAC
CGCACCTTCA TCGAAGACGC GCATCTCGCA CAAGCCTGCG CGAACATCGC CCAGCTCGAT
TGGACCGACC TGGACGACCG CATGCGCGCC AACGCGCTGG CCAACGACAC GCTGTCGTAT
CTGGTCCAGA CACAGGGCCG CACGCGGGCG CTCGCCGTGC GTGGCGGGTT GGCGCCGCAC
GTGTGCCGGC GCATTGCCAC GCGCATCGAT GCCGAACTGC ATCTGCCCCT GTCGCTCGGA
CAACTGGCGG CAGAAGCAAA TCTGTCGGAA TTCCATTTCG CGCGGATGTT TCGCGCGTCG
TTCGGGGCCG CGCCGCATGA GTGGGTGATG CAGCAACGCA TGGCGCGTGC ACAAATGCTG
CTGCGCACCA CCACCCTTGC GCTGGCGACG ATTGCCGAGC GCTGCGGCTT TGCCAGCCCG
AGCCATTTCA GCCGGCGATT TGCACTCCAG CTTGGCGCGT CGCCATCACG CTACCGGCAG
GCCTGGCAAC GGGGGTAG
 
Protein sequence
MRRAPTSPST QPADPRVTAD ASVFGTLARG SRASLERVTN LGDGVTAAIW RNEHDEARYI 
QPGHHTLSVY LQGGYTTHRQ DLPHLFGAPG RVCMLPAEHQ SSWVIEQPMR FVHLYFAPDA
LAGHAVRLLD AEPRLFTLHD RTFIEDAHLA QACANIAQLD WTDLDDRMRA NALANDTLSY
LVQTQGRTRA LAVRGGLAPH VCRRIATRID AELHLPLSLG QLAAEANLSE FHFARMFRAS
FGAAPHEWVM QQRMARAQML LRTTTLALAT IAERCGFASP SHFSRRFALQ LGASPSRYRQ
AWQRG