Gene Rpic12D_4323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4323 
Symbol 
ID8022011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp938877 
End bp939317 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content63% 
IMG OID644833098 
ProductUspA domain protein 
Protein accessionYP_002984238 
Protein GI241665879 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.729204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0224521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACCC ATATCCTCCT GCCGACCGAC GGCTCCGAGC AGTGCCGCAA GGCCATCGAC 
GGCGCACTCG AGCTGGCGCG AGCCACCGGC TGCCGCCTCA CCGCCTATAC GTGCATTGAA
GAATTTCCCA ACATGGCCTA TTCGGCAGGC GTGGGGGAGT GTCCGCATGC GTACTACATG
GAAACGGTGC AGGGCTACGC CAAAGACTGC ATCGAGCGCA TTGCAGAGCG GGCGCGAGAA
GAAGGCGTGC AGTTCGACAG CGATGTGTCG CAGTTTGCCG AGCCTTACCT GGGCATTCTT
GACGCGGCCG AGCGGCACGC GTGCGACGTC ATCTTCATGG CATCGCACGG GCATCGCAGC
CTGATGGGGC GACTGTTGAT CGGCAACGAG ACGCGCAAGG TCCTGACCTA CGCGCACGTG
CCAGTGGTGG TCTACCGCTA G
 
Protein sequence
MFTHILLPTD GSEQCRKAID GALELARATG CRLTAYTCIE EFPNMAYSAG VGECPHAYYM 
ETVQGYAKDC IERIAERARE EGVQFDSDVS QFAEPYLGIL DAAERHACDV IFMASHGHRS
LMGRLLIGNE TRKVLTYAHV PVVVYR