Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4323 |
Symbol | |
ID | 8022011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 938877 |
End bp | 939317 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644833098 |
Product | UspA domain protein |
Protein accession | YP_002984238 |
Protein GI | 241665879 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.729204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0224521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACCC ATATCCTCCT GCCGACCGAC GGCTCCGAGC AGTGCCGCAA GGCCATCGAC GGCGCACTCG AGCTGGCGCG AGCCACCGGC TGCCGCCTCA CCGCCTATAC GTGCATTGAA GAATTTCCCA ACATGGCCTA TTCGGCAGGC GTGGGGGAGT GTCCGCATGC GTACTACATG GAAACGGTGC AGGGCTACGC CAAAGACTGC ATCGAGCGCA TTGCAGAGCG GGCGCGAGAA GAAGGCGTGC AGTTCGACAG CGATGTGTCG CAGTTTGCCG AGCCTTACCT GGGCATTCTT GACGCGGCCG AGCGGCACGC GTGCGACGTC ATCTTCATGG CATCGCACGG GCATCGCAGC CTGATGGGGC GACTGTTGAT CGGCAACGAG ACGCGCAAGG TCCTGACCTA CGCGCACGTG CCAGTGGTGG TCTACCGCTA G
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Protein sequence | MFTHILLPTD GSEQCRKAID GALELARATG CRLTAYTCIE EFPNMAYSAG VGECPHAYYM ETVQGYAKDC IERIAERARE EGVQFDSDVS QFAEPYLGIL DAAERHACDV IFMASHGHRS LMGRLLIGNE TRKVLTYAHV PVVVYR
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