| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4316 |
|---|
| Symbol | |
|---|
| ID | 8022004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 930796 |
|---|
| End bp | 932187 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644833091 |
|---|
| Product | Di-heme cytochrome c peroxidase |
|---|
| Protein accession | YP_002984231 |
|---|
| Protein GI | 241665872 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.65624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTG TGCTGCCCGC TGCAACGTTT CGCGTGATCG CCGTATCGGC GCTTGCCGGC
GTGGTCGTCG TGTTGTGCGG GTGCGGGCGG GGCGATCCTG CGGCCCATGC CGCAACCGTG
GCGGCTTCGG CACCAGCAGC GGTGGCGCCA TCGACGGCGG CGGGCGTAAA GCCCGCAGCG
GCCCCTGCCT ACGAGAAAGC CTTCTACACG ATGATGGCTA CGCGCCGCCC GTCGGTGCCT
GCAATGGCGG CGCTTGGCAA GGCGCTGTTC TTCGATCCTG CCCTGTCTGC CTCGGGCAAG
CAGGCCTGCG CCAGCTGCCA TAGCCCGACA CATGCCTATG GCCCACCGAA CGATCTGTCG
GTCCAGCTTG GCGGCACGGG CATGAACAAG ACGGGCGTGC GCGCAGCACC ATCGCTGCGC
TATCTGCAGA AGGTGCCGCC GTTCTCCGAA CACTTTTACG AGAGCGACGG CAACGACTCG
GAAGACCAGG GCCCGACCGG CGGCTACACG TGGGATGGCC GCGTGTCGTC CACGCACGAC
CAGGCGCGCA TCCCGCTGCT GTCGGGGCAC GAGATGGCCA ACGGAACGCA GGCCAGCGTC
GTGGCCAAGC TGCGCAATGG CCGCCACGCG CAGACGTTCC GCCAGGTATT CGGCAACGAC
ATCCTCGACA ACGAAGACAC CGCCTTCCGC GCGGCACTGA TGGTGCTCGA GGTCTTCCAG
GAAACACCGT CCGAGTTCTA TCCGTATGAC AGCAAGTACG ACGCGTTCTT GCGCAAGCAG
GTGAAGCTGT CGCCGCAGGA GTTGCGCGGG CTGAAGGCGT TTGCCGATCC GGCCAAGGGC
AACTGCGCGT CGTGCCACGT GAGCGCCATC AAGCAGGACG GGGCGTTCCC GGCCTTCACC
GATTTTGGCC ACATCGCCGT GGGCGTGCCA CGCAATCGCT CGCTGGCCGC CAATGCGGAT
CCGAAGTTCT TCGACCTGGG CCTGTGCGGC CCCGACCGGA CCGATCTCAA AGACCGCACG
GACTATTGCG GCCGCTTCCG CACGCCGTCG CTGCGCAACG TGGCGCTGCG CAAGACGTTC
TTCCACAACG GCGCCATCCA CTCGCTGGAA GACGCGGTGC GCTTCTACGC CCAGCGCGAC
ACGCAGCCGC AGAAGTGGTA CCCGCGCAAG GCTGACGGCA CGGTCGACAA GTTCGATGAT
CTGCCGACCC AGTACCGCGC CAACGTCAAC ATGGAGCCGC CGTTTGGCGG CAAGCCGGGC
GACAAGCCTG TGCTGTCCGA GGCCGACGTG CGCGACATCG TTGCGTTTCT CAAGACGCTC
ACCGACGGCT ATCGCCCCGT GCGGGCGACG CAATCCGGCA GCCAAGGCGG CAGCCGCGTC
GCACAGCGCT AA
|
|---|
| Protein sequence | MSRVLPAATF RVIAVSALAG VVVVLCGCGR GDPAAHAATV AASAPAAVAP STAAGVKPAA
APAYEKAFYT MMATRRPSVP AMAALGKALF FDPALSASGK QACASCHSPT HAYGPPNDLS
VQLGGTGMNK TGVRAAPSLR YLQKVPPFSE HFYESDGNDS EDQGPTGGYT WDGRVSSTHD
QARIPLLSGH EMANGTQASV VAKLRNGRHA QTFRQVFGND ILDNEDTAFR AALMVLEVFQ
ETPSEFYPYD SKYDAFLRKQ VKLSPQELRG LKAFADPAKG NCASCHVSAI KQDGAFPAFT
DFGHIAVGVP RNRSLAANAD PKFFDLGLCG PDRTDLKDRT DYCGRFRTPS LRNVALRKTF
FHNGAIHSLE DAVRFYAQRD TQPQKWYPRK ADGTVDKFDD LPTQYRANVN MEPPFGGKPG
DKPVLSEADV RDIVAFLKTL TDGYRPVRAT QSGSQGGSRV AQR
|
|---|
| |