| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4310 |
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| Symbol | |
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| ID | 8021998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 923399 |
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| End bp | 925294 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644833085 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002984225 |
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| Protein GI | 241665866 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.917762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCGG CCGCCGTCGG CACGATTGGG CGGTTGCTGC TCGAATCGGC AATGGGCATC
CATTTGCCGT TCTACCTGGC CTTTCCGGTG GTAACAATTG CCGCGTGGTA TGGCGGCTTC
TGGCCGGGGA TGCTGGCCAT CGTCTGCTAT GCGGGGCTGT TCATCGCATT GGCTGCACTG
CAAAGCTGGC CTGCCGCTGT GCCGCTCACG CCGATCCAGA TGACGGTGTT TGGGGTGGGC
GCACTGCTTA TCTGCGCCTT GTGCGAGCAG TTGCGTCGTG CCCGCGCCGG GGCTGAACGG
CGCGCGCGGG CCGAAACCCA GCAACGCCTG TCGCAGCAAC GCCTGCTGGC CGCGCTGCAG
GCTTCGCCCA TTTCGCTCTA CGACGTCGAC AACACGATGC ACTTCACGTG GGTGCACAAC
CCCGTGTTCG GCCTGCAGCC CGAGCAGTTG CTGGGACGGA CGGTGCGCGA AGTGTTCGGC
CGCCGCGCTG CATCGCGCCT GACCGAAGCC GGCCAGCGCG TCATCGCAAC GGGCACGCCT
ACGCGCGTGG AGTTCGCGTT CCGGCGGCGC CACACGCAGC GCGTGGTCTA CGACGTGGTG
GTCATGCCGC TGCGCGACGA CACCGGCGAG ATCATCGGCC TGACGAACGC CGTGATCGAC
ATCAGCGAAC GCCGCCAGGC CGAGGCCCGC CGCACGCAGT TGCTCGAAGC CGAATCCCGC
GCCCGCGAAG AGGCCGAGCG CGCCAGCCGC CTGAAAGACG ACTTCCTGGC GACCGTCAGC
CACGAGCTGC GCACGCCGCT CAATGCGGTG CTGGGCTGGG CGCAATTGCT GAACATGCGC
GCGTACGACG AAGCGATGTT CAAGCGCGGC ATTGAAGCCA TCGAGCGCAG CGCCCGCACG
CAGGTCCACC TCATCGACGA CCTGCTCGAC ATGTCGGCCA TCCTTTCGGG CAAGGTTCCA
CTGGAGATTG GCCCCGTAGA TCTGGCCGAC GTGCTGGAAC GCGCGCGCGA GACCATCGAG
CCGATGGCGC GCCAGAAGAA CATCACCATC GAGACCGAAT TCCTGCCCGT GCCGATGCTG
CAAGGCGATG CCGGGCGCCT GAAGCAGGTG TTCTGGAACC TGCTGGCCAA TGCCGTCAAG
TTCACGCCCG AGGGCGGCCA CATCCGGCTC TCGGTGCATC CGGCGCCCGA AGGCGTGGTC
GCCACCGTGC GCGACACCGG CATCGGCATC GAGCCCACCT TCCTGCCGCA TATTTTTGAT
CGGTTCCAGC AGGCGGACCT GTCCAGCACG CGTCGGCACG GCGGGCTCGG GCTGGGGTTG
GCGATTGCCA AACAACTCGT CGAACTGCAC CACGGCCGCA TCACGGCAGC CAGCAGCGGT
GCGGACCGTG GCACCACCAT GGCCGTGTCG TTGCCGCTGC ATGCCGCGCA GCCGGGCGAA
CAGGCCAACC GCACGCCGGG CCTCGTCGCG GGGACGGGCG TGCCGACACT GGACGGCATC
CGCGTGCTGG CAGTGGATGA CAACCCCGAG TCGCTCGGCG TGATCGCGCT GATGCTCGAG
CGCTACGGGG CCGACGTTGT CACCGTATCC AGCGGGGCGG CCGCACTCGA TGCGCTGGAA
CATGCAGTCG CCAACGCCTA CCCGTTCGAT GCGCTGGTCA GCGACCTCGC CATGCCGGGC
ATGGACGGCA TGCAGTTAGT GCGGGCCGTG CGCGAACGCG GTTGGACCGA CCTGCCCGCC
ATCGCAGTGA CGGCATTTGC CGACCCGATC CGCCTGAAGG CGGCGAAGGA GGCCGGGTAC
CAATCCGTCA TCACCAAGCC GATTTTCCCG GGCGAACTGG GCCACGTGCT GGCCGCCAAT
GTGCATCGCA AGACCGGGCC TGAAACGCTG GTGTGA
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| Protein sequence | MGAAAVGTIG RLLLESAMGI HLPFYLAFPV VTIAAWYGGF WPGMLAIVCY AGLFIALAAL
QSWPAAVPLT PIQMTVFGVG ALLICALCEQ LRRARAGAER RARAETQQRL SQQRLLAALQ
ASPISLYDVD NTMHFTWVHN PVFGLQPEQL LGRTVREVFG RRAASRLTEA GQRVIATGTP
TRVEFAFRRR HTQRVVYDVV VMPLRDDTGE IIGLTNAVID ISERRQAEAR RTQLLEAESR
AREEAERASR LKDDFLATVS HELRTPLNAV LGWAQLLNMR AYDEAMFKRG IEAIERSART
QVHLIDDLLD MSAILSGKVP LEIGPVDLAD VLERARETIE PMARQKNITI ETEFLPVPML
QGDAGRLKQV FWNLLANAVK FTPEGGHIRL SVHPAPEGVV ATVRDTGIGI EPTFLPHIFD
RFQQADLSST RRHGGLGLGL AIAKQLVELH HGRITAASSG ADRGTTMAVS LPLHAAQPGE
QANRTPGLVA GTGVPTLDGI RVLAVDDNPE SLGVIALMLE RYGADVVTVS SGAAALDALE
HAVANAYPFD ALVSDLAMPG MDGMQLVRAV RERGWTDLPA IAVTAFADPI RLKAAKEAGY
QSVITKPIFP GELGHVLAAN VHRKTGPETL V
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