Gene Rpic12D_4302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4302 
Symbol 
ID8021990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp913118 
End bp913744 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID644833077 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_002984217 
Protein GI241665858 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTATCG ATTCCGTCGT CAAGGCCGGC CCGGTCATCC CGGTGCTGCA GTTCCAATCT 
GTCGATGAAG GCGTCAAGGT GTGCCGCGCG CTGTACGAGG GCGGTATCCG CACGTTCGAG
ATCACGATGC GCACGCCGGT AGCGCTGGAC GTGATCCGGG CCGTGGTGAA GGACCTGGGC
AGCGACGCCA TCGTCGGTGC CGGCACGCTC ACGCGGCCGG AGCATTTCCA GCAGGCGAAG
GATGCCGGTG CGGTGTTTGC GGTATCGCCG GGCATTACGC CCATGCTGGC CGCGGCACAG
GGGAAGACTG AACTGGACTG GCTGCCCGGC ATCGCCACGC CGTCCGAGCT GATCCTGGCG
CTGGAGTTCG GCCTGACGAC GCTCAAGTTC TTCCCGGCCG AAGCGGCTGG CGGCATCCCG
ATGCTCAAGT CGATCTACGG GCCGTTCGGC GATGTGCGTT TCTGCCCGAC CGGCGGCATC
ACGCCGCAAA GCGCGCCCGA CTACCTCGCG CTGCCCAACG TGGTGTGTGT GGGCGGCTCA
TGGATGGTGC CCAAGGACAA GGTCGCTGCC GGCGACTGGG CAGGCATCAC GGCGCTCGCC
AAGGAAGCAG CCGCGCTCAA GCGGTAA
 
Protein sequence
MGIDSVVKAG PVIPVLQFQS VDEGVKVCRA LYEGGIRTFE ITMRTPVALD VIRAVVKDLG 
SDAIVGAGTL TRPEHFQQAK DAGAVFAVSP GITPMLAAAQ GKTELDWLPG IATPSELILA
LEFGLTTLKF FPAEAAGGIP MLKSIYGPFG DVRFCPTGGI TPQSAPDYLA LPNVVCVGGS
WMVPKDKVAA GDWAGITALA KEAAALKR