Gene Rpic12D_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4299 
Symbol 
ID8021987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp909495 
End bp909932 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content72% 
IMG OID644833074 
Productprotein of unknown function DUF333 
Protein accessionYP_002984214 
Protein GI241665855 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCG CTGTCTGTCT CGTCAAGGAT GCTGGCCAGG CCCGCATGAC CGCCGCCGTT 
GCCACGTGTG TGCTGGCGAT GGGTCTGGCA GCCTGCTCGT CGCCGATGCC TCCGTGGGAG
CCGCCGCGCA CGATCATCCA ACCCGCGCCC CCGCCGCCGA GGCCCGCACC CGCGCCGCCT
ACCCCGCTGC CACCGTCGCC TGCCATGCAG CCGGCGCCCG CCCAGCCGCC GGCCTACGCG
CCTCCGCCTG CCGGCGACAC CGAACCGCCA CGCGCAACGC CCGGCATGGC GAATCCGGCA
TCCACGTATT GCCTGCAGCG CGGCGGTCAG CTTGAGTTTT CCACGCGCGC CAACGGCGCT
GAAGTGGGAA CCTGCGTCAG CCCCGGCGGC GACGAATGCG AGGAATGGGC GTTCCTGCGC
GGCAGTTGTA CGTGGTGA
 
Protein sequence
MNRAVCLVKD AGQARMTAAV ATCVLAMGLA ACSSPMPPWE PPRTIIQPAP PPPRPAPAPP 
TPLPPSPAMQ PAPAQPPAYA PPPAGDTEPP RATPGMANPA STYCLQRGGQ LEFSTRANGA
EVGTCVSPGG DECEEWAFLR GSCTW