Gene Rpic12D_4283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4283 
Symbolcls 
ID8021971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp885888 
End bp887321 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content65% 
IMG OID644833058 
Productcardiolipin synthetase 
Protein accessionYP_002984198 
Protein GI241665839 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.551808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA ACACCACCGC ATTTGCCGCC TTTCTCTTTC TTGTGCACTC CGTGGGCGTG 
CTCGCGGCCA TGCATGCCGT GCTGACCGTG CGTACGTCCC AGGGCGCCAT CGCCTGGGCC
ATCTCACTGG TTACGCTGCC TGAGTTCACG CTGATCCCCT ATCTGATCTT CGGGCGCAGC
ACCTTTGCCG GTTATGTGGA CGCGCGCCGC TTTCACAACG CCCGCCTGCG AGAAATCACC
CTGTCCGACG ACTGGCGCCG CCTGCGCGAC CATGAATCGA GCGTGGTCGC GCCGCAGCAC
ACCTGCATGC AGGCTTTGCC GCGCCTGACC GGCACACCGT GCCTGGCACG CAACCGCGTA
CGGTTGCTCG TCAACGGCGC GGAAACCTTC GAGGCCATCT TTGCGGCCAT TGCGCAGGCG
CGCCGGGTGC TGATCGTGCA GTTCTTCATC GTGCACGACG ACACGCTTGG CCGCCGACTC
GCCGAACTGC TGCTCGATCG CGCGCGGGCC GGGGTGCGCG TCTACTTTCT TTTCGACAGC
ATCGGCTGCC ACGCGCTGCC TCGCCGCTAT GTGCAGCGGC TCATTGAAGG CGGCGTACAC
GCCAAGCCGT TCTCCACCCA TGCCGGGTTC GTCAACCGCT TCCAACTCAA TTTCCGCAAC
CACCGCAAGC TCGTGGTGGT GGACGGCGAG CGCGCTTACG TGGGCGGCCA CAACGTCGGC
AACGAATACA TGGGCGAAAA GCCGCCGCTT GCACCGTGGC GCGACACGCA TATCGAGATC
GTCGGTGCCG CCGTGATGGA CCTGCAGCTC ACCTTTGCCG AAGACTGGTA CTGGGCTGCC
CGCGAAGTGC CGCAGCTGAT CGTGCCCGAA CTGCGGCCGG AAGAAGACAT GGTCTGCCAG
GTGGTCGCCA GCGGCCCAGC CGACAAGCAG GAAACCTGCT CGCTGTTCTT CATGGAGGCC
ATTCAGTCGG CGCGCAAGCG GCTGTGGATC ACGTCGCCGT ACTTCATTCC GGACGAAGCG
GTGTTTGCCG CGCTGCGCCT GGCCGTGCTG CGCGGGGTGG ACGTGCGCAT CCTGATCCCG
TCGCGGCCGG ACCATCACAT GGTGTTCCTG GCGTCCACGT TGTATGCGTA TCAGGCGATC
CGCGCGGGCG TGAAGATCTA CCGCTACCTG CCCGGCTTCC TGCACCAGAA GGTCGTGCTG
ATCGACGACG AGGCCGCCGC CGTGGGCAGT GCCAACCTCG ACAACCGTTC GTTCCGCCTG
AACTTCGAAC TGATGATCAT GACCGCCGAC TCGCGCTTCG CCAACGACGT CGCGCAGATG
CTCGAAGTCG ATTTTGCCGA AGCCGCCCGC GTTGGCCGTG ACGAATACGA ACATGCACAC
CCGCTGCGCC GCGTGATCAT GCACGTGGCC AAGCTGTTCG CGCCCATCCT GTAG
 
Protein sequence
MLTNTTAFAA FLFLVHSVGV LAAMHAVLTV RTSQGAIAWA ISLVTLPEFT LIPYLIFGRS 
TFAGYVDARR FHNARLREIT LSDDWRRLRD HESSVVAPQH TCMQALPRLT GTPCLARNRV
RLLVNGAETF EAIFAAIAQA RRVLIVQFFI VHDDTLGRRL AELLLDRARA GVRVYFLFDS
IGCHALPRRY VQRLIEGGVH AKPFSTHAGF VNRFQLNFRN HRKLVVVDGE RAYVGGHNVG
NEYMGEKPPL APWRDTHIEI VGAAVMDLQL TFAEDWYWAA REVPQLIVPE LRPEEDMVCQ
VVASGPADKQ ETCSLFFMEA IQSARKRLWI TSPYFIPDEA VFAALRLAVL RGVDVRILIP
SRPDHHMVFL ASTLYAYQAI RAGVKIYRYL PGFLHQKVVL IDDEAAAVGS ANLDNRSFRL
NFELMIMTAD SRFANDVAQM LEVDFAEAAR VGRDEYEHAH PLRRVIMHVA KLFAPIL