Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4272 |
Symbol | |
ID | 8021960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 871948 |
End bp | 872508 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644833047 |
Product | hypothetical protein |
Protein accession | YP_002984187 |
Protein GI | 241665828 |
COG category | [K] Transcription |
COG ID | [COG1510] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.2022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.341622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCT CTCCCTTGAA ACAGCGCTTC GTCCTGCATT TCGGCGAGAT GGGCAGCCGC TGGGGCATCA ACCGCACCGT CGGGCAGATC TACGCGCTGC TCTATGCTGC GCGCGAGCCG ATCAACGCGG ACGAGATCGC CGAGTCGCTG GGCTTCTCCC GCTCGAACGT GAGCATCGGG CTCAAGGAGC TGGAGTCGTG GAAGCTGGTG CGGCTGTCGC ACAAACCGGG CGACCGGCGC GAATACTTTT CGGCCCCTGA CGACATCTGG ACCATCTTCC GCACGCTGGC GGAAGAACGC CGCAAGCGGG AGATCGACCC CACGCTTTCG CTGCTGCGCG ACGTGATGCT CGAATCCCCC ACGGATCCGG ATGACCGCCA CGCGCAAGCG CGCATGAAAC AGATGTACGA GCTCATCACG CTCATGACCA ACTGGTTTGA CGACGTGCAG AAGCTCGACG CCGAATCGCT GCAGCAACTC ATGAAGATGG GCGCCAAGGT GCATAAGTTG CTGGAAATGA AGAACAAGCT TGCCGTTGTC GTTGGCGGCA AGTCCAAGTA G
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Protein sequence | MQLSPLKQRF VLHFGEMGSR WGINRTVGQI YALLYAAREP INADEIAESL GFSRSNVSIG LKELESWKLV RLSHKPGDRR EYFSAPDDIW TIFRTLAEER RKREIDPTLS LLRDVMLESP TDPDDRHAQA RMKQMYELIT LMTNWFDDVQ KLDAESLQQL MKMGAKVHKL LEMKNKLAVV VGGKSK
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