| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4266 |
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| Symbol | |
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| ID | 8021954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 865232 |
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| End bp | 866812 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644833041 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002984181 |
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| Protein GI | 241665822 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.657921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCC GCCCGAGCAT TGAACCGCCC AAGCCAGACA CGCCTACTGC GCCCATCGCG
TCGGCATCCA GCCCGCTGGA TGCGCTACCC GTGCCTGAAA TTCCGGTGAT GGCAGTGATG
GGCGGGCTGA TGCTCGCCAT CTTGCTGGGC GCGCTGGAGC AAACCATCGT TGCGGTGGCC
TTGCCCGTGA TCGCGGGCGA ATTCAACGGC TTTGCGCTGA TGGCCTGGTT GGTGTCGGCG
TATCTGGTGG CGTCCACGGT GGTGACGCCC ATCTACGGCA AATTGAGTGA CCTCTACGGC
CGCCGCGCCA TGCTGACGAC GGCCATCGTG CTGTTCGTGC TGGCGTCGGT GGCGTGTGCG
GTGGCGACCA GCATGCCGAT GCTGTTGTTT GCACGCGTGC TGCAGGGGCT GGGCGGCGGC
GGTCTGATCT CGGTATCGCA GGCCACGATC GCCGATGTGG TGCCGCTGCG CGAGCGTGGC
CGCTACCAGG GCTACGTGAG CGGCATGTGG GCCATGGCCA GCCTCGCCGG ACCGGTGATC
GGTGGCTATC TGACGCATTA CCTCTCGTGG CGCTGGATTT TCTGGATCAA CCTGCCCCTG
GGCATCGTCG CGCTGTTCGT CGTGCGCCGC ACGCTTCGGC ATCTGCCGGT GGCGCATCAG
CGCCGCCCCA TCGACGTGCC CGGCGTGGTG CTGTTTGCCG GAGGCCTGAC AGCGCTGTTG
CTGATGATCA CCCGCGTGGG GCAGGGCACG CCGCTCACGC AGCCCGAAAA CCTTGGCCTG
CTGGCGGCGG CGGTGGTGCT GCTGGGCGCG TTTGTCTGGC AAGAGAACCG CGCCGTCGAG
CCGATCATTC CGCTGTCGAT GTTCCGGGTC CGTACCGTCA CGATCTGCTG CCTGGCGCTG
TTCCTGTGCT TCTTCCAGCT GATCGCCACG TCGGTGCTGA TGCCCCTGCG CTTCCAGATG
GTGGCGGGTG CCAGCCCCGA TGCCGCCGCG CTGCGCCTCG TGCCGCTCAC GCTGTCGATT
CCGCTTGGCG CCTTCATTGC CGGCAAATGG ATGACGCACA GCGGTCGCTA CAAGCCCCTG
ATGCTGGGTG GCGCATGCGT GGTGCCGTTT GCCGTGGCAT CGCTGGGTCT GCTGGACCCG
CACAGCGTGT TGGCGCTGAC CCTGGCGATG ATCGTGCTTG GCCTGTCGAT TGGCGTGCAG
TTCCCGACCG GCCTGGTGGC CACGCAAAAT GCGGTGTCGC CGCAGACGGT GGGTCTGGCC
ACGGCACTGA CCGCCTTCTC GCGCCTGCTG GGTGGCGCGG TGGGTGTGGC GGTGCTGACG
TCCGTGCTGA TTGCGCTGCT GCGTCAGGCT GCGCCCGAAG CGCAGGTAGC GGCCGGTGGC
GACGTGCTGA TGGACCTTTT CCATGCCGCG CTTGCCAGCA GCGGTGCCGA TGCCCAGGCC
CTGCAGCGCG CAGGCGAGAG CGCGTTCCGG CATCTGTTCT TCTTTGCCGC TGCGGTGTCG
GTTATTTCGC CGCTGTTGGT CATGCGGCTG GAAGAGAAGG CGCTGCGCGG CAAGGTGTCG
CTTGCCGAGG CTGTCGAGTA A
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| Protein sequence | MSSRPSIEPP KPDTPTAPIA SASSPLDALP VPEIPVMAVM GGLMLAILLG ALEQTIVAVA
LPVIAGEFNG FALMAWLVSA YLVASTVVTP IYGKLSDLYG RRAMLTTAIV LFVLASVACA
VATSMPMLLF ARVLQGLGGG GLISVSQATI ADVVPLRERG RYQGYVSGMW AMASLAGPVI
GGYLTHYLSW RWIFWINLPL GIVALFVVRR TLRHLPVAHQ RRPIDVPGVV LFAGGLTALL
LMITRVGQGT PLTQPENLGL LAAAVVLLGA FVWQENRAVE PIIPLSMFRV RTVTICCLAL
FLCFFQLIAT SVLMPLRFQM VAGASPDAAA LRLVPLTLSI PLGAFIAGKW MTHSGRYKPL
MLGGACVVPF AVASLGLLDP HSVLALTLAM IVLGLSIGVQ FPTGLVATQN AVSPQTVGLA
TALTAFSRLL GGAVGVAVLT SVLIALLRQA APEAQVAAGG DVLMDLFHAA LASSGADAQA
LQRAGESAFR HLFFFAAAVS VISPLLVMRL EEKALRGKVS LAEAVE
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