Gene Rpic12D_4264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4264 
Symbol 
ID8021952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp863440 
End bp864066 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content66% 
IMG OID644833039 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_002984179 
Protein GI241665820 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.772372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.532472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCC TTCACATTGA TTCCAGCATC CTCGGTGACG CCTCGGCTTC GCGCCTGCTG 
AGCGCCGCCA TTGTTGACGA GCTGCGCCGC GAAAACCCCA GCGCCACCGT CGTCCACCGT
GATCTGTCGG TCGAAGCGAT CCCCCACCTG GACGGCGCCA TTGCCGCCGG CTTCCGCGCC
ACGGGCGCCG ATGATTTTGA CGACGCGACC CGCGCAGAGC ATGCACGCTC AGAAACGCTC
GTGAATGAAC TGCTCGCCAG CGACGTGATC GTGGTCGGCG CGCCGATGTA CAACTTTTCG
GTGCCCAGCC AGCTCAAGGC CTGGATTGAC CGCGTGGCGC AAGCCGGCCG TACGTTCAAG
TACACGGAAA CGGGCCCGGT CGGACTGGCC GGTGGCAAGA AGGTGATCGT TGCGTCGACG
CGCGGCGGCA TGTACTCCGC CGGCCCGGCC GCCGCCATGG ATTTCCAAGA GGCCTATCTG
AAGACCGTGT TCGGCTTCTT CGGTATCACC GATGTGCAGT TCGTGCGTGC AGAACGCCTG
GCGATGGGCC CGGACGCCCG CGCACAAGCC CTGGAAGCCG CACACGCCGC CATGCGCGAC
GTTGTGAGCC AGGCCGTGGC AGCCTGA
 
Protein sequence
MQVLHIDSSI LGDASASRLL SAAIVDELRR ENPSATVVHR DLSVEAIPHL DGAIAAGFRA 
TGADDFDDAT RAEHARSETL VNELLASDVI VVGAPMYNFS VPSQLKAWID RVAQAGRTFK
YTETGPVGLA GGKKVIVAST RGGMYSAGPA AAMDFQEAYL KTVFGFFGIT DVQFVRAERL
AMGPDARAQA LEAAHAAMRD VVSQAVAA