| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4255 |
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| Symbol | |
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| ID | 8021943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 856878 |
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| End bp | 858575 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644833032 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002984172 |
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| Protein GI | 241665813 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGC TGGACGCCTT CCTGCGGTGC CGCGACTTTC TGCTCGCGCA CCGTGAGGAT
TACGATACCG CTGTGCGCGA TTTTGCATGG CCCCAGTTGG ACCGCTTCAA CTGGGCGCTG
GATTATTTCG ACGCCATGGC GCGCGGCAAC GATGCCGTCG CCCTCTGGGT GGTCGACGAT
CAGGGCAACG AGACGCGGCT GTCGTTTGCG CAGATGGCCG AGCGTTCGGC GCGCGTGGCC
AACCACTTGC GGGCGCTTGG CGTGCAGCGC GGTGACCGCA TCCTGCTCAT GCTCGGCAAC
GTGCCCGGGC TATGGGACGT GATGCTCGCC AGCATCAAGA TCGGCGCGGT CATCATCCCG
GCCACGACGC TGCTCACCGC AGAAGACCTG CGCGAACGCA TTGCCATGGG GGAGGTGAGC
CACGTGGTGG TGGGCGGGGC AGATTGCGCC AAGCTCGACG CCGTATCGGG CACGTTCACA
CGCATTGCGG TCGGTACGGA CAAGGCGCCG GCCGGCTGGC ACCGCTTTGA AGACGCCTAC
GATGCCTCCG CCGAATTCAC CCCCGACGCG CCCACGCAGG CGAGCGATCC GTTGCTGCTG
TATTTCACGT CCGGCACCAC GTCCAAACCC AAACTCGTGA TGCATACGCA TGCGAGCTAT
CCGGTCGGGC ATTTGTCCAC CCTGTACTGG ATCGGCCTGC GCCCGGGGGA TGTGCACTGG
AACATCAGCT CGCCCGGCTG GGCCAAGCAC GCGTGGAGCT GCTTCTTCGC GCCGTGGAAT
GCCGGCGCCA CCGTCTTCAT CTACAACTAC GCGCGCTTCG AGCCCAAAGC AGTGCTGGAT
GTGCTCTGCC GGGCCAAGGT GACGACGCTG TGCGCACCGC CCACGGTGTG GCGCATGTTG
ATCCAGGAAG ACTTGGCCGC GTGGAAGCCC GCCCTGCGCG AACTCGTGGG CGCGGGCGAA
CCGCTCAACC CGGAGGTGAT CGAACGGGTG CGCGCGGCGT GGGGCATCAC CATCCGCGAC
GGCTACGGTC AGACCGAAAC GACCTGCCAG ATCGGCAACA GCCCGGGGCA GCGCGTCCAG
CCAGGCTCGA TGGGTCGGCC GCTGCCGGGA TATCGCATCA CGCTGCGCGA CCCCGACGGC
CACGAAGCGG AAGAGGGCGA GATCTGCATC GAATTGAATT CACGCCCGAC CGGCCTGATG
GAAGGCTACG CCGGTAACGC CGACAAAACC GCCGAAGCCA TGCGCGGCGG CGTGTATCAC
ACCTCTGACA TTGCCGCGCG CGATGCCAGC GGCTACCTGA CCTACGTGGG CCGCGCCGAT
GACGTATTCA AGGCATCGGA TTACCGTGTC AGCCCATTCG AGCTGGAGAG CGTGCTGATC
GAACACCCTG CCATCGCGGA GGCCGCCGTC GTGCCGAGCC CCGACCCGCT GCGCCTTGCC
GTGCCGAAGG CTTTCTTGGT ACTGCGTGCG GGGCACGAGG CCGGCCCGGA ACTGGCGCGG
GACATCCTCG GATTTTGCCG CAGCCGATTG GCTTCCTACA AACGCGTGCG CCGCATCGAA
TTTGCCGATC TGCCCAAAAC CATCTCGGGC AAGATCCGGC GAGTCGAACT GCGCATGCGT
GAAGCCGCGC GCAGCGAGAA CACCGCTGGC GTGCGCAACC TGCAGGAATA TTGGGAAGAG
GATTTCCCGG GCGATTGA
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| Protein sequence | MTSLDAFLRC RDFLLAHRED YDTAVRDFAW PQLDRFNWAL DYFDAMARGN DAVALWVVDD
QGNETRLSFA QMAERSARVA NHLRALGVQR GDRILLMLGN VPGLWDVMLA SIKIGAVIIP
ATTLLTAEDL RERIAMGEVS HVVVGGADCA KLDAVSGTFT RIAVGTDKAP AGWHRFEDAY
DASAEFTPDA PTQASDPLLL YFTSGTTSKP KLVMHTHASY PVGHLSTLYW IGLRPGDVHW
NISSPGWAKH AWSCFFAPWN AGATVFIYNY ARFEPKAVLD VLCRAKVTTL CAPPTVWRML
IQEDLAAWKP ALRELVGAGE PLNPEVIERV RAAWGITIRD GYGQTETTCQ IGNSPGQRVQ
PGSMGRPLPG YRITLRDPDG HEAEEGEICI ELNSRPTGLM EGYAGNADKT AEAMRGGVYH
TSDIAARDAS GYLTYVGRAD DVFKASDYRV SPFELESVLI EHPAIAEAAV VPSPDPLRLA
VPKAFLVLRA GHEAGPELAR DILGFCRSRL ASYKRVRRIE FADLPKTISG KIRRVELRMR
EAARSENTAG VRNLQEYWEE DFPGD
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