| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4241 |
|---|
| Symbol | |
|---|
| ID | 8021929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 843055 |
|---|
| End bp | 845205 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644833019 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_002984159 |
|---|
| Protein GI | 241665800 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGCCG CCTCCCCCAC CCCAGACACC GCCAATGCGC CGGCCACGCC GGGTTACCTG
GCCCAGCTGA ACGACCAGCA GCGCCAGGCA GTCGAGTTCG GTATCTCTGG AGCGGACGCG
GCGGAAACCG GGCCGCTGCT CGTGCTGGCC GGCGCAGGGT CCGGCAAGAC GCACACGCTG
GGCTGGCGCG TGGCGCATCT GGTGGCCAAC GGCGCCGATC CGCAACGCAT CCTGCTGCTG
ACGTTTTCCC GCCGGGCGGC GAGCGAACTG TCGAACCGTG CCGGCCACCT GCTGGCGCGA
GCCATGCAGG GCGAGCGATC GAACAACGCC CTCAATTCGG CCGGCACGTC GTACAAGACC
ACGCTGCCCT GGGCGGGCAC CTTCCACGGC ATCGGCGCGC GCCTGCTGCG CGAATATGCC
GAGCGCGTGG GCCTCGCCCC CGATTTCACC ATCCATGACC GCAGCGACTC GGCCGATCTG
CTCAACGTCG TGCGCCATGA GCTGAACCTG TCGACCAAGG AACGCCGCTT CCCGCTCAAG
CAGACCTGCA TTGCGATCTA CTCGCGCGCC ATCAACGCCG AGAGCCCGCT GAACGCCGTG
CTGAAGCACC ATTTTCCGTG GTGCGCGATG TGGGAAACGC AATTGCGCAC GCTGTTCGAT
GCGTATGTCG AAGCCAAGCA AGCGCAGCAC GTGCTCGACT ACGACGACCT CCTGCTCTAC
TGGCACGCGA TGGTGTCCGA CGCCGAACTG GCGGCCGAGA TTGGCGCCCG TTTCGACCAC
ATCCTCGTCG ACGAATACCA GGACACCAAC CGGTTGCAGT CATCCATCCT GCGTGCGTTG
CGCCCGGACG GCCGCGGTGT GACCGTGGTG GGCGACGACG CGCAATCGAT CTACGCATTT
CGCGCGGCGA CGGTACGCAA CATCCTCGAT TTTCCGCGCC ACTTCTCGCG GCCGGCGCAC
ACGGTGCTGC TGGAGCGCAA TTACCGGTCA ACGCAACCGA TTCTGGATGC CTCCAACGGC
GTGATGCGTT TTGCCACGGA GCGCTTTGCC AAGACGTTGT GGACGGACCG CGCATCGACG
CATCGGCCGC GCTTGATTTC AGTGCGTGAC GAGGCCGAGC AGGCGCGTTG CGTGGCTGAG
CAGGTGCTGC ATCACCGTGA AGGCGGGCTG ACGCTGAAAT CGCAGGCGGT GCTGTTTCGC
ACCGCGAGCC ACAGCGCGCC GCTGGAGATC GAACTCACGC GCCGCAACAT CCCGTTCGTG
AAATACGGCG GCCTCAAGTT TCTGGAGGCG GCACATGTGA AGGATGTGCT GTCGGTACTG
CGCTGGGCCG AGAACCCGCG CAACCGCATT GCCGGGTTTC GCGTGATCCA GTTGCTGCCA
GGTGCAGGCC CCGCCACGGC GGCACGCGTG CTCGACGCCA TGGCGGAAGC GGCGGACCCG
ATTGCCGCGC TGCTCGCCTA CGAGCCACCG GCGCGGCTGG CCGGCGACTG GTCTACGCTG
ATGGCGCTCA TGCAAACCCT GCGCGTGCCC AAAGACAGCC TGGAATGGGC TGGCGAACTC
GAAGCCGTAG GCGCTTGGTA CTCGCCGCAC ATGGAGCGCC TGCACGACGA CGCGGCCGTG
CGCCAGGGCG ATCTCGACCA GCTCGCCCGC ATGGCCGCAA CGTACGCCAC CCGGGAGCGC
TTCCTGACCG AGATGACGCT CGACCCGCCC GAGTTGACCA GCGATGAATC GGGCGACCCA
TACCGCGACG AGGACTACCT GATCCTCTCG ACGATCCATT CGTCGAAAGG TCAGGAATGG
AAGGCGGTGT ATGTGCTGAA TGCCGTGGAC GGCTGCATGC CGGCCGATCT GGGCGCCGGC
TCGCACGAAG AACTGGAAGA AGAACGCCGG CTGCTCTACG TGGCGATGAC CCGTGCGCGT
GAGCACCTCG ACATCCTGGT GCCCCAGCGT TTCTACGTCA CCCAGCAAAC ACCCAATGGC
GATCGGCACA TCTACGCGTC GCGCACGCGC TTCATTCCGC CTGCGCTGCT GCCGCTGTTC
GAAGCCTGCG CATGGCCGGA ACCGGAGCCC GGTGCAGACC CCGCAGCCGA GGCGCGTGCC
GCGGCCAAGG TCGACCTGAG CAAGAAGATG CGCGGCTACT GGAAAAAGTA G
|
|---|
| Protein sequence | MLAASPTPDT ANAPATPGYL AQLNDQQRQA VEFGISGADA AETGPLLVLA GAGSGKTHTL
GWRVAHLVAN GADPQRILLL TFSRRAASEL SNRAGHLLAR AMQGERSNNA LNSAGTSYKT
TLPWAGTFHG IGARLLREYA ERVGLAPDFT IHDRSDSADL LNVVRHELNL STKERRFPLK
QTCIAIYSRA INAESPLNAV LKHHFPWCAM WETQLRTLFD AYVEAKQAQH VLDYDDLLLY
WHAMVSDAEL AAEIGARFDH ILVDEYQDTN RLQSSILRAL RPDGRGVTVV GDDAQSIYAF
RAATVRNILD FPRHFSRPAH TVLLERNYRS TQPILDASNG VMRFATERFA KTLWTDRAST
HRPRLISVRD EAEQARCVAE QVLHHREGGL TLKSQAVLFR TASHSAPLEI ELTRRNIPFV
KYGGLKFLEA AHVKDVLSVL RWAENPRNRI AGFRVIQLLP GAGPATAARV LDAMAEAADP
IAALLAYEPP ARLAGDWSTL MALMQTLRVP KDSLEWAGEL EAVGAWYSPH MERLHDDAAV
RQGDLDQLAR MAATYATRER FLTEMTLDPP ELTSDESGDP YRDEDYLILS TIHSSKGQEW
KAVYVLNAVD GCMPADLGAG SHEELEEERR LLYVAMTRAR EHLDILVPQR FYVTQQTPNG
DRHIYASRTR FIPPALLPLF EACAWPEPEP GADPAAEARA AAKVDLSKKM RGYWKK
|
|---|
| |