Gene Rpic12D_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4214 
Symbol 
ID8021902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp818390 
End bp819052 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID644832993 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_002984133 
Protein GI241665774 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCG TTCGCGTTGC GGGCTTCACC CTCTCGCTTG ACGGATACGG CGCAGGTCCG 
GATCAGGACA TCAACAATCC GCTCGGCATT GGCGGGATGG AGCTGCACCA GTGGCTGGTC
GCGACGCGCA CGTTCCAGCG GACCCTGTTC GGCAAGGACG GCGGTACAAC TGGCGTTGAC
GATGACTTTG CCGCCCGTAG TTTCCGGAAC GTGGGGGCGT GGATTCTCGG GCGCAACATG
TTCGGCCCCA TTCGCGGGGA TTGGCCCGAC GACAATTGGA AAGGCTGGTG GGGCGACAAC
CCGCCGTATC ACGTTCCCGT TTTCGTGTTG ACCCACCACG CGCGTGCGCC CATCGAGATG
GCGGGCGGCA CGACCTTCCA CTTCATCACA GGCGGCTTTC GAGAAGCGCT CGACCGTGCG
CGCGAGGCCG CTGGCGGGAA GGATGTACGC ATTGGCGGAG GGCCGAGCAC CATCCGGCAG
TACCTGCGTG AAGGCCTCAT CGATGAACTG CACATCGCGA TCTCGCCGGT CTTGCTTGGC
CGAGGGGAAC CCCTGTTTGA GGGGATCGAC TTGCGAGCGC TGGGCTACGC GTGCGTTGAA
TCCGTAGCAT CAGAAAAGGC GACGCATGTT GTTTTGCGGC GCCCATTGCC TACGAATACT
TAA
 
Protein sequence
MTRVRVAGFT LSLDGYGAGP DQDINNPLGI GGMELHQWLV ATRTFQRTLF GKDGGTTGVD 
DDFAARSFRN VGAWILGRNM FGPIRGDWPD DNWKGWWGDN PPYHVPVFVL THHARAPIEM
AGGTTFHFIT GGFREALDRA REAAGGKDVR IGGGPSTIRQ YLREGLIDEL HIAISPVLLG
RGEPLFEGID LRALGYACVE SVASEKATHV VLRRPLPTNT