| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4209 |
|---|
| Symbol | |
|---|
| ID | 8021897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 814758 |
|---|
| End bp | 815807 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644832989 |
|---|
| Product | Monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_002984129 |
|---|
| Protein GI | 241665770 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.537485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCG TCAATCTGCG CGCACTGACT GGCCACCGAT TGTTCTGGCC GGGCGTGACG
CTGCTTTTGC TGTGTCTGCT CAACGCGTGG TTCAACCCGC ATTTCTTTCA CCTCGACATT
CGTAATGGGC ATCTGTACGG CAGCCTGATC GACATCCTCA ACCGCGCAGC ACCGCTCATG
CTCGTATCGC TCGGCATGAC GCTGGTGATT GCGGTGGGCG GCATCGATAT TTCAGTGGGC
GCGGTGGTCG CCATTTCCGG CGCCATTGCG GCATCGCTTG TCGGCGGCAC GCTGGTCGTG
CAGAACGGCC TGCCCGTGTA TGTGACCAAG GCCCCACTGC TGCTGGCGCT GCTGGCTGCG
GTGGGCGCAG CGTTGGTGTG CGGCCTGTGG AATGGCCTGC TGGTGGCGGG TGCGGGCATG
CAGCCCATCA TCGCCACGCT GATCCTGATG GTGGCCGGCC GCGGCGTGGC GCAGCTCATT
ACCGGCGGCC AGATCATCAC CGTGTACTAC GAGCCGTTCT TCTTCGTGGG CAATGGCTAT
CTGTTCGGGC TGCCGTTTGG GTTGTACATC GCGGCTGCTG TGCTGGGCCT GTTGTTGCTG
TTGATGCACC GCACGGCGCT GGGTCTGTTT GTCGAGGCCG TCGGCATCAA CCCCGTGGCC
GCGCGTCTTG CGGGGCTCAA CACCAAGGCG CTGCTGTTTG GCATCTACGC ATTCTGCGGC
GCCATGGCCG GTGTTGCGGG GCTCATCATC TGCTCCAACG TCAAGAGCGC GGACGGCAAC
AACGCCGGGC TGCTGCTGGA GCTTGACGCC ATCCTGGCCG TCACGCTGGG CGGTACCTCC
CTGGCGGGCG GCAAGTTCAG CCTGTGGGGC AGCGTGATCG GGGCGCTCAT CATCCAGACG
CTGACCTACG CGATCTATTC GATGGGTGTG CCGCCAGAAA TCAACCTCGT GGTGAAAGCC
GTGGTGGTGT TTGCCGTATG CCTGGCGCAA TCGGAGGCGT TTCGCAGCAT GCTCTTTCAA
CGCCACAGCC GTGCGGGGGC GCAGTCATGA
|
|---|
| Protein sequence | MNPVNLRALT GHRLFWPGVT LLLLCLLNAW FNPHFFHLDI RNGHLYGSLI DILNRAAPLM
LVSLGMTLVI AVGGIDISVG AVVAISGAIA ASLVGGTLVV QNGLPVYVTK APLLLALLAA
VGAALVCGLW NGLLVAGAGM QPIIATLILM VAGRGVAQLI TGGQIITVYY EPFFFVGNGY
LFGLPFGLYI AAAVLGLLLL LMHRTALGLF VEAVGINPVA ARLAGLNTKA LLFGIYAFCG
AMAGVAGLII CSNVKSADGN NAGLLLELDA ILAVTLGGTS LAGGKFSLWG SVIGALIIQT
LTYAIYSMGV PPEINLVVKA VVVFAVCLAQ SEAFRSMLFQ RHSRAGAQS
|
|---|
| |