Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4206 |
Symbol | |
ID | 8021894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 810916 |
End bp | 811701 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832986 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002984126 |
Protein GI | 241665767 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCT CAAATTTGCA CCGCCAACCT GCCCCGCCGC TCTATGAGCG CATCAAGGGC ACGCTGCGCG AGGGCATTCT CAGCGGCCAC TACGCGCCGG CCTCGCTGCT GCCGTCGGAA GCGGCGCTGG GCGAGCAGTT CAACGCCAGT CGCATCACCG TGCGTCAGGC ACTGGCCGAT CTGCAGAACG AAGGGCTGAT CTTCCGCCGT CACGGCAAAG GCACGTTTGT GAGCCAGCCC AAGGCCTTTC AGAACGTGAC GGCGCTGCAG GGCTTTGCCG AGGCGATGTC GGCACAAGGT CATGCCATCC GTAACCGCGT GCTGAAGCTG CGCACGCTGC CCGCGCCGAC CGACGTGGCA CAGGCGCTGC AACTGGCACC TGGCACGGCC GTCACGGAAT TGCATCGCGT GCGGTTGCTC GATCAGGTGC CGGTTTCCCT TGAGGTGACG TGGCTGCCGG AGCCGCTGGG CAGCAGCGTC GCGCGGGCGG ACCTCGTCAC GCGCGATGTT TTCCTCGTGC TGGAGCAGGA CGCAGGGGTG GCGCTCGGTC ATGCGACGCT GGCCATCGAT GCGGCGCTGG CCGACCACGC CACCGCAACC GCACTCGACA CGGGCGCAGG CGCGGCACTG TTGCGCGTGG AGCGTCTGAC GCACGACGCA CAGGGCACGC CCATCGATTT TGAACGCCTG TATTTTCGCG GCGACGCTTT CCAGTACCGG CTTCGGCTGG ATCGGCAGGT GGCGGCGCAT GCGCAATCCA TCCTTCCTTT GCAAGGCACC AAATGA
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Protein sequence | MTTSNLHRQP APPLYERIKG TLREGILSGH YAPASLLPSE AALGEQFNAS RITVRQALAD LQNEGLIFRR HGKGTFVSQP KAFQNVTALQ GFAEAMSAQG HAIRNRVLKL RTLPAPTDVA QALQLAPGTA VTELHRVRLL DQVPVSLEVT WLPEPLGSSV ARADLVTRDV FLVLEQDAGV ALGHATLAID AALADHATAT ALDTGAGAAL LRVERLTHDA QGTPIDFERL YFRGDAFQYR LRLDRQVAAH AQSILPLQGT K
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