Gene Rpic12D_4206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4206 
Symbol 
ID8021894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp810916 
End bp811701 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID644832986 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002984126 
Protein GI241665767 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT CAAATTTGCA CCGCCAACCT GCCCCGCCGC TCTATGAGCG CATCAAGGGC 
ACGCTGCGCG AGGGCATTCT CAGCGGCCAC TACGCGCCGG CCTCGCTGCT GCCGTCGGAA
GCGGCGCTGG GCGAGCAGTT CAACGCCAGT CGCATCACCG TGCGTCAGGC ACTGGCCGAT
CTGCAGAACG AAGGGCTGAT CTTCCGCCGT CACGGCAAAG GCACGTTTGT GAGCCAGCCC
AAGGCCTTTC AGAACGTGAC GGCGCTGCAG GGCTTTGCCG AGGCGATGTC GGCACAAGGT
CATGCCATCC GTAACCGCGT GCTGAAGCTG CGCACGCTGC CCGCGCCGAC CGACGTGGCA
CAGGCGCTGC AACTGGCACC TGGCACGGCC GTCACGGAAT TGCATCGCGT GCGGTTGCTC
GATCAGGTGC CGGTTTCCCT TGAGGTGACG TGGCTGCCGG AGCCGCTGGG CAGCAGCGTC
GCGCGGGCGG ACCTCGTCAC GCGCGATGTT TTCCTCGTGC TGGAGCAGGA CGCAGGGGTG
GCGCTCGGTC ATGCGACGCT GGCCATCGAT GCGGCGCTGG CCGACCACGC CACCGCAACC
GCACTCGACA CGGGCGCAGG CGCGGCACTG TTGCGCGTGG AGCGTCTGAC GCACGACGCA
CAGGGCACGC CCATCGATTT TGAACGCCTG TATTTTCGCG GCGACGCTTT CCAGTACCGG
CTTCGGCTGG ATCGGCAGGT GGCGGCGCAT GCGCAATCCA TCCTTCCTTT GCAAGGCACC
AAATGA
 
Protein sequence
MTTSNLHRQP APPLYERIKG TLREGILSGH YAPASLLPSE AALGEQFNAS RITVRQALAD 
LQNEGLIFRR HGKGTFVSQP KAFQNVTALQ GFAEAMSAQG HAIRNRVLKL RTLPAPTDVA
QALQLAPGTA VTELHRVRLL DQVPVSLEVT WLPEPLGSSV ARADLVTRDV FLVLEQDAGV
ALGHATLAID AALADHATAT ALDTGAGAAL LRVERLTHDA QGTPIDFERL YFRGDAFQYR
LRLDRQVAAH AQSILPLQGT K