| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4186 |
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| Symbol | |
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| ID | 8021874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 791744 |
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| End bp | 792772 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644832966 |
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| Product | D-xylose ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_002984106 |
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| Protein GI | 241665747 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA ACCAACGCCG TTGTGTTCTG AGGGCCGCCT TTTGCGGTGC AGTGCTCGCC
AGCCTGTCGA TGGGCGCGCC GCTGGCGCAC GCGAGCAAGG CGCATCCGGA AATCGGCTTC
TGTATCGACG ATCTGCGCGT GGAGCGCTGG TCGCGCGACC GCGATTACTT TGTCGCCGCT
GCAGAAAAAC TGGGTGCCAA GGTGTCGGTG CAATCGGCGG ACGCCAGCGA GCAACGCCAG
ATCTCGCAGA TCGAGAACCT GATCTCGCGC GGTGTCGACG TGATCGTCAT CGTGCCGTTC
AACTCCAAGG CGCTGACCAA CGTGGTGGCC GAAGCCAAGA AGGCGGGCAT CAAGGTGGTG
TCATATGACC GCCTGATTCT CGATGCCGAC GTTGACGCCT ACATTTCGTT CGATAACGAG
AAGGTGGGTG AACTGCAAGC GCAGGGCGTC TTCAACGTGC GCCCGAAGGG CAACTACTTC
CTGCTGGGCG GCGCGCCGAC GGACAACAAC GCGAAGATGC TGCGGCAGGG CCAGTTGAAG
GTGCTGCAGC CTGCCATCGA CCGTGGCGAC ATCAAAGTTG TTGGCTCGCA ATGGGTGCCC
GAGTGGAGCG CCTCTGCGGC GCTGGGTATC GTTGAAAACG CGCTGACCGC GAACAACAAC
AAGATCGATG CCGTGGTCGC ATCCAACGAC GGCACGGCCG GTGGCGCGAT CCAGGCGCTG
GCTGCGCAGA AGCTGGCCGG CAAGGTGCCG GTGTCGGGCC AGGATGCGGA CCTTGCCGCC
GTCAAGCGCG TGATTGCCGG CACGCAGACG ATGACGGTCT ACAAGCCACT CAAGCTGATT
GCCACCGAGG CTGCGCAGCT TTCGGTAGCC CTCGCCAAGG GCGACAAGCT CAAATACAAC
GCGCAGTACG ACAACGGCAA GAAAAAGGTC GACACGGTGC TGCTGCAACC CACCCAACTC
ACCAAGGACA ACGTCAACCT GGTGGTGAAA GACGGCTTCT ACACGCAGGC TCAGATCAGC
GGCCAGTAA
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| Protein sequence | MKSNQRRCVL RAAFCGAVLA SLSMGAPLAH ASKAHPEIGF CIDDLRVERW SRDRDYFVAA
AEKLGAKVSV QSADASEQRQ ISQIENLISR GVDVIVIVPF NSKALTNVVA EAKKAGIKVV
SYDRLILDAD VDAYISFDNE KVGELQAQGV FNVRPKGNYF LLGGAPTDNN AKMLRQGQLK
VLQPAIDRGD IKVVGSQWVP EWSASAALGI VENALTANNN KIDAVVASND GTAGGAIQAL
AAQKLAGKVP VSGQDADLAA VKRVIAGTQT MTVYKPLKLI ATEAAQLSVA LAKGDKLKYN
AQYDNGKKKV DTVLLQPTQL TKDNVNLVVK DGFYTQAQIS GQ
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