Gene Rpic12D_4175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4175 
Symbol 
ID8021863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp778132 
End bp778956 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID644832955 
ProductNosY transmembrane protein 
Protein accessionYP_002984095 
Protein GI241665736 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.876766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA TCGAATATCG GCAAGTGGCC GCCGTGGCGG CCAAAGAACT GCGCGATCGC 
CTGCGCAACC GATGGGTGCT CGCAGTGGCC GTCGTCTTCG CCGTGTTCTC GCTCGTGATC
AGCTACTTTG GCGGCGCCGA GCAGGGCACG CTCGGGCCGC GGTCCATCGA GTTCGTCATT
ACCAGCTTGG TCAGCCTCGT CATCTACCTG ATCCCGCTGA TTGCGCTGTT GCTTGGGTTC
GATGCCGTTG TGGGCGAGCG CGAGCGCGGC TCGCTCGATC TGCTGCTGGC CCTCCCGCTG
ACGCGCGTGG AACTGCTGCT GGGCAAATAC CTCGGGCTCG CCGCAGCGCT CACCCTGTCG
ACGTTGGGTG GCTTCGCGCT GATGGCCGTG CTCCTGTGGC ACCAGTTCGG CTCGGCGGGG
CTGTATCAGG CGGCTGGCTT CGTGCTGAGT TCGGTGCTGC TGGGGCTGGT CTTTCTGAGC
CTGGCGCTGT TCGTCTCTGT CGTCAGCCGT GAGCGCACGC GTGCTTCGGG CGCCGCCATC
GCGCTGTGGT TTGGCTTCGT GCTGATATTC GACCTGTTGC TGCTCGGCCT GCTCGTCGCC
ACCGGCGGCA GCTTTGGTGG CCAGGCGCTG GCGTATCTGC TGCTGCTCAA TCCCACCGAT
ATTTTTCGCA TCCTCAACGT GTTTTCGCTG GACCAGCTGC GGGGCTTGCA TGGCCTCGTC
AGCATCGTGC CGCCTGCCCT GGGCAACCCG TGGGCGATGG GCGCGGCGAT GCTGGCTTGG
ATTGCCGCGC CGCTGGCACT GGCCGCCTGG AGATTCCGCG CATGA
 
Protein sequence
MIGIEYRQVA AVAAKELRDR LRNRWVLAVA VVFAVFSLVI SYFGGAEQGT LGPRSIEFVI 
TSLVSLVIYL IPLIALLLGF DAVVGERERG SLDLLLALPL TRVELLLGKY LGLAAALTLS
TLGGFALMAV LLWHQFGSAG LYQAAGFVLS SVLLGLVFLS LALFVSVVSR ERTRASGAAI
ALWFGFVLIF DLLLLGLLVA TGGSFGGQAL AYLLLLNPTD IFRILNVFSL DQLRGLHGLV
SIVPPALGNP WAMGAAMLAW IAAPLALAAW RFRA