Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4175 |
Symbol | |
ID | 8021863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 778132 |
End bp | 778956 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832955 |
Product | NosY transmembrane protein |
Protein accession | YP_002984095 |
Protein GI | 241665736 |
COG category | [R] General function prediction only |
COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.876766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCA TCGAATATCG GCAAGTGGCC GCCGTGGCGG CCAAAGAACT GCGCGATCGC CTGCGCAACC GATGGGTGCT CGCAGTGGCC GTCGTCTTCG CCGTGTTCTC GCTCGTGATC AGCTACTTTG GCGGCGCCGA GCAGGGCACG CTCGGGCCGC GGTCCATCGA GTTCGTCATT ACCAGCTTGG TCAGCCTCGT CATCTACCTG ATCCCGCTGA TTGCGCTGTT GCTTGGGTTC GATGCCGTTG TGGGCGAGCG CGAGCGCGGC TCGCTCGATC TGCTGCTGGC CCTCCCGCTG ACGCGCGTGG AACTGCTGCT GGGCAAATAC CTCGGGCTCG CCGCAGCGCT CACCCTGTCG ACGTTGGGTG GCTTCGCGCT GATGGCCGTG CTCCTGTGGC ACCAGTTCGG CTCGGCGGGG CTGTATCAGG CGGCTGGCTT CGTGCTGAGT TCGGTGCTGC TGGGGCTGGT CTTTCTGAGC CTGGCGCTGT TCGTCTCTGT CGTCAGCCGT GAGCGCACGC GTGCTTCGGG CGCCGCCATC GCGCTGTGGT TTGGCTTCGT GCTGATATTC GACCTGTTGC TGCTCGGCCT GCTCGTCGCC ACCGGCGGCA GCTTTGGTGG CCAGGCGCTG GCGTATCTGC TGCTGCTCAA TCCCACCGAT ATTTTTCGCA TCCTCAACGT GTTTTCGCTG GACCAGCTGC GGGGCTTGCA TGGCCTCGTC AGCATCGTGC CGCCTGCCCT GGGCAACCCG TGGGCGATGG GCGCGGCGAT GCTGGCTTGG ATTGCCGCGC CGCTGGCACT GGCCGCCTGG AGATTCCGCG CATGA
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Protein sequence | MIGIEYRQVA AVAAKELRDR LRNRWVLAVA VVFAVFSLVI SYFGGAEQGT LGPRSIEFVI TSLVSLVIYL IPLIALLLGF DAVVGERERG SLDLLLALPL TRVELLLGKY LGLAAALTLS TLGGFALMAV LLWHQFGSAG LYQAAGFVLS SVLLGLVFLS LALFVSVVSR ERTRASGAAI ALWFGFVLIF DLLLLGLLVA TGGSFGGQAL AYLLLLNPTD IFRILNVFSL DQLRGLHGLV SIVPPALGNP WAMGAAMLAW IAAPLALAAW RFRA
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