| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4164 |
|---|
| Symbol | |
|---|
| ID | 8021852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 765538 |
|---|
| End bp | 766419 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644832944 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_002984084 |
|---|
| Protein GI | 241665725 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAC AAAACTTGGC GCCAGTTTCG CCGACGCTCG CGTCGCGCGA GTTTTCATTC
ACCGCCGAAG ATTTCGGCCG CATCCGCGAC CTGATCTACC GGCGCGTCGG CATCTCGCTG
TCCGACCGCA AGAGTGAAAT GGTCTATAGC CGGCTGGCCC GCCGCCTGCG TGTGGTCAAC
CTCGGTTCGT TCCGCGACTA CCTCGATGCA CTGGAAAAAG GCCACCTGCC CGACGAGTGG
GAGGCCTTTA CCAACGCGCT GACCACCAAC CTCACCGCGT TCTTCCGCGA GCAGCATCAC
TTCCCGATCC TGCACGAGCA CGCCAAGGCC AAGCGCACGC CGTTCACCGT GTGGTGTTCG
GCATCGTCGA CCGGCGAAGA GCCGTACTCG ATCGCCATCA CGCTGGCCGA AGCCTTTGGC
TCGATGTCGC CCAGCCAGGT GAGCGTGATT GCCTCGGATG TGGATACCAA CGCGCTGGCC
CGCGCCCGCG CCGGCATCTA TCCGATGGAG CGTGTCGCGG CCCTGTCGCC CGAGCGCCTG
AAAAAGTATT TCCTGCGCGG CACCGGCAAG CACGAAGGCT ATGCCCGCGT GCGGCCCGAG
TTGCAGGCCA TGATCGACTT TCGCCAGATC AACCTGCTCG ACCGCGATTG GCCGTTGCAG
CAGAAGTTCG ACGTGATCTT CTGCCGCAAC GTGATGATCT ATTTCGACAA GCCCACGCAG
GCCAAGATTC TTGAGCATTT CATCGACGTG ATGAAACCCG ATGGCCTGCT GTTTGCCGGC
CATTCGGAGA GCTTCCTGCA GGTCACCAAG GCGTGGTCGC TGCGCGGCAA GACCGTGTAC
GAGATCGCCC CCGAGCTGCG CGCCAGGATG GGGGCACGAT GA
|
|---|
| Protein sequence | MAAQNLAPVS PTLASREFSF TAEDFGRIRD LIYRRVGISL SDRKSEMVYS RLARRLRVVN
LGSFRDYLDA LEKGHLPDEW EAFTNALTTN LTAFFREQHH FPILHEHAKA KRTPFTVWCS
ASSTGEEPYS IAITLAEAFG SMSPSQVSVI ASDVDTNALA RARAGIYPME RVAALSPERL
KKYFLRGTGK HEGYARVRPE LQAMIDFRQI NLLDRDWPLQ QKFDVIFCRN VMIYFDKPTQ
AKILEHFIDV MKPDGLLFAG HSESFLQVTK AWSLRGKTVY EIAPELRARM GAR
|
|---|
| |