Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4152 |
Symbol | |
ID | 8021840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 750828 |
End bp | 752015 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832932 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_002984072 |
Protein GI | 241665713 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.642873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTGC CTCTCGCGGG TTTGCGCGTG CTCGACTTGT CGAACGTGCT GGCCGGGCCG TTCTGCGGCT ATCAGCTGGG TTTGCTCGGC GCTGAAGTCA TCAAGGTCGA AGTGCCCGGC AATGGCGACC TCGCCCGCCG TCTCGGGGCG GATCCGGAGC AGGCGCGCCG CAAGATGGGC GCCTCGTTCG TCGCCGTCAA TGCGGGCAAG CAGTCCGTCA CCGTCAACCT GAAACACCCG GAAGGGCGCG CGATCCTGCT CAAGCTGGTG GCGCAGGCCG ATGCGCTGAT CGAAAACTAT CGCCCCGGCG TGATGGACCG CCTGGAACTC GGCTACGACG TGCTGCGCGA GGTGAATCCG CGTCTTGTCT ACTGCGCCAT CTCGGGCTTC GGCAAGGATG GCCCGCTTAG CGGCAGACCG GCATACGACC AGATCATCCA GGGCATTTCC GGCGTGATGA GCGTCACCGG CGACGACGCA TCGGCGCCGC TGCGCGTGGG TTACCCGATC AGCGATACGG TGGGCGGCAT CACGGCGGCG CTGGCCGTCA CCGCCTGCCT GCTCGGCGCG CAACGCACGG GGCAGGGCTG CATGGTCGAT GTGTCGATGC TGGAATCGAC GCTCGCCACC ATGGGCTGGG TCGTCTCCAA CTATCTGAAC GCCGGCGTCA CGCCACAGCC GATGGGCAAC CAGAATTTCA CCGCCGCGCC GTCGGGCACA TTCACCACGG GCGATGGACT GATCAACATC GCCGCCAACG AAGACAAGCA GTTTGCCGCG CTGTGCCGCG TGGTGGGGCA TCCGGAGCTG GCCACCGACG CGCGCTTTGC CGAGCGCCAT GCACGCAAGG AGCATCGCCA GCAGCTCAAC GACGCGCTGG AAGCAGCGTT GGCCGCGCGC CCGGCCACCG AATGGGAACC GCTGCTGATC GATGCCGGCG TTCCTGCCGG GCTGGTGCTC GACGTGCCTG GCGTGCTGGC GCACGAACAA GTGACGGGCC GCGGCTTTGT CACCGCGTTC CCGGAAGCGG GGCAGCACGT GACGCGCGCG GGGTTCCGCC TCTCGGGCGA AGACCCGTGC CCGCAGACCC CCGCGCCAAT GCTCTCCGCC CATACCGACG ACTGGCTCAC CAGGCTCGGT TACCGCCACG ACCAAATCGA AGCCTTGCGC GCTGAAGGCG CCATCTGA
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Protein sequence | MALPLAGLRV LDLSNVLAGP FCGYQLGLLG AEVIKVEVPG NGDLARRLGA DPEQARRKMG ASFVAVNAGK QSVTVNLKHP EGRAILLKLV AQADALIENY RPGVMDRLEL GYDVLREVNP RLVYCAISGF GKDGPLSGRP AYDQIIQGIS GVMSVTGDDA SAPLRVGYPI SDTVGGITAA LAVTACLLGA QRTGQGCMVD VSMLESTLAT MGWVVSNYLN AGVTPQPMGN QNFTAAPSGT FTTGDGLINI AANEDKQFAA LCRVVGHPEL ATDARFAERH ARKEHRQQLN DALEAALAAR PATEWEPLLI DAGVPAGLVL DVPGVLAHEQ VTGRGFVTAF PEAGQHVTRA GFRLSGEDPC PQTPAPMLSA HTDDWLTRLG YRHDQIEALR AEGAI
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