Gene Rpic12D_4150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4150 
Symbol 
ID8021838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp748937 
End bp749941 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID644832930 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_002984070 
Protein GI241665711 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT GGATTTCGGC CCTGTTGTGT GCGGCCGTCT GTTCCGCAGC CAACGCCGCC 
GAGCCGGAGA AGAAGGACGT GAGCCTGTCG GTCGGCTCGA TGATCCTGAA CTACATGCCG
GTGCCGCTCA CGCAGTCGCT GGGCAACTTC CAGAAGGAAG GGCTCAACGT CAAGGTGGAG
AATTTCCAGG CCGGCGGCAG CAAGGCGCTG CAGGCGCTGA TTGCCGGTTC GACCGATGCG
GTGGTGGGCT TCTATGACCA CACCATCCAC ATTCAGGCGC AGGGCAAGGA CATTGTGTCG
GTCGCGCTGC TCAACGTTAC GCCCGGCATC GTGCTGGCCG TGCGGCCCGA CCTGGATATC
AAGAGCGGCA AGGATCTGAA GGGCAAGAAG ATCGGCATTA CCGCGCCGGG TTCGTCCACC
GATCTGTTTG CCCGCTATTA CGCCATCAAG AACGGGCTGC AGGTGAACGA CGTGTCCTAC
GTCGCGGTGG GTTCCGGCGC ACCGGGCATG GTGGCGCTGG ATCGCAAGGA GATCGATGCA
CTCGTCAATT TCGACCCCGT GGCGAGCCTG CTGGAGAAGC GCCGCGCCGC CAAATTCCTC
GTCGATACGC GCACCGATGC CGGTTCCAAC GCGGTATTCG GCGGCCGCTA CCCGACCGCC
ACGCTGTATG TCACGCGCGA CTTTATGACA AAGAACCCCG AGACCGTCCA GCGCCTGGTG
AATGCCTTCA TCCGCACGCT CAAATGGATC GACGCCAGCA CGCCCGAGGC CATTGCCGAC
AAGATGCCCA AGGAGCAGCA GGTGGGTGGG CGCGACGTGT TTGTCGATGC GCTGCGCCAC
TCCAAGCCGA TCTTCTCCAA GGACGGCCTG ATGACCGATG CCGATGCCAA GGTGGCCCTC
ACGGTCCTCT CGAGCTACGA CGAAAAGATC CGCAGCGCCA GGATCGACCT GGCGAAAACG
TACACTAACC GCTTCGTCGA CCAAGCCTTG AAGACGGTCA AGTGA
 
Protein sequence
MKRWISALLC AAVCSAANAA EPEKKDVSLS VGSMILNYMP VPLTQSLGNF QKEGLNVKVE 
NFQAGGSKAL QALIAGSTDA VVGFYDHTIH IQAQGKDIVS VALLNVTPGI VLAVRPDLDI
KSGKDLKGKK IGITAPGSST DLFARYYAIK NGLQVNDVSY VAVGSGAPGM VALDRKEIDA
LVNFDPVASL LEKRRAAKFL VDTRTDAGSN AVFGGRYPTA TLYVTRDFMT KNPETVQRLV
NAFIRTLKWI DASTPEAIAD KMPKEQQVGG RDVFVDALRH SKPIFSKDGL MTDADAKVAL
TVLSSYDEKI RSARIDLAKT YTNRFVDQAL KTVK