| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4140 |
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| Symbol | |
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| ID | 8021828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 739102 |
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| End bp | 739776 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644832920 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_002984060 |
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| Protein GI | 241665701 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.700414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCTC TGCCCGAAAC ACCCAAGCAA CGCATCGCAG CCCGCTGCGC GCAAGAACTG
CACCCGGGCG AAGTCGTCAA CCTTGGCCTG GGTATCCCAA CGCTCACAGC CAACTACCTG
GACGCCGAAG CGGGCGTCAT CTTCCATACC GAAAACGGCG CCTTCGGCTT TGGCGGACGC
CCCGCGCTGG ACGCCATCGA CAGCGACTTC ACCAACGCCG GCTGCGAGCC CATCACCCTG
ATGCCCGGCG CGGCGCTCAT GGACCTCGCC ACGTCGCTGG GCGCGATGCG CAACGGCTAC
ATCGACGTGA CGATCCTCGG CGCGTTGCAG GTGGATGCGC TGGGCAACCT CGCCAACTGG
GCCTGCGATC GCAACGGCAA ATGGTGGCCC GGCATTGGCG GGGCGATGGA CCTCTGCTAC
GGCACGCGCA AGGTGATTGC CGCGCTGGCG CACACCGACA AACACGGCAA TTCCAAGATC
CTGCCGCGCT GCACGCTGCC GCTCACGGGC CGGGCCTGCG TGAAGGTCAT CGTCACCGAG
CACGCCGTGT TTGACGTGAC CGATGCGGGG CTCGTGCTGC GTGAAATCCT CTCGCATGCG
ACACTCGACG ACATTCGCGC CATGACAGCA GCGCCCTTTA CACTGGCGCC GCTGCTGCAG
ATGCGCGCCG CCTGA
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| Protein sequence | MQALPETPKQ RIAARCAQEL HPGEVVNLGL GIPTLTANYL DAEAGVIFHT ENGAFGFGGR
PALDAIDSDF TNAGCEPITL MPGAALMDLA TSLGAMRNGY IDVTILGALQ VDALGNLANW
ACDRNGKWWP GIGGAMDLCY GTRKVIAALA HTDKHGNSKI LPRCTLPLTG RACVKVIVTE
HAVFDVTDAG LVLREILSHA TLDDIRAMTA APFTLAPLLQ MRAA
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