Gene Rpic12D_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4139 
Symbol 
ID8021827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp738457 
End bp739092 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID644832919 
ProductDSBA oxidoreductase 
Protein accessionYP_002984059 
Protein GI241665700 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA CCGTCGATTG GTTCTTCGAT GTCATCTCGC CGTTTGCCTA CCTGCAGCTC 
GAACAGTTCG ACGCGCTGCA GAAGGCGAAC GACATCGTCA TCCGCCCGCG TCCGCTCGTG
CTGGGCGCGA TCCTGCATCA CTGGGGGCAG AAAGGGCCGG CCGAGATCAG CACCAAGCGC
GTGTTCACAT ACCGGCATGC GCTGTTTCGC GCGCAGCAGC TCGGCATTCC CTTTCGCATG
CCGCCCGCGC ATCCGTTCAA CCCGATCAAG GCATTGCGGC TGACGATTGC GATGGGCGGC
TCGCTCGATG TCGTGCGAGC GGTGTTCCGG CATATCTGGC GCGACGGCAA CGATGTGGCG
TCGCCCGAGG GCTTTGCCGC GCTGTGCGAG GCGGTGGGCT TTGCAGAGGG CGCGGCCGCT
GTCGAACAAC CCGCTGTGAA AGATGCGCTG CGTGCGCACA CCGATGCAGC TATCGCGCTC
GGCGTGTTCG GGGTGCCCAC CCTGGTGCAC GAAGGCGAGC TGTTCTGGGG TGAAGATGCG
ACCGCCATGT TCCTGCAGAG CCTGCGCGCC GGCTGGCTCT CCACGCCCGA AGCGCAGCGC
GTGAGCACGT TGCCGGTGGG CATTCAACGT GGCTGA
 
Protein sequence
MPATVDWFFD VISPFAYLQL EQFDALQKAN DIVIRPRPLV LGAILHHWGQ KGPAEISTKR 
VFTYRHALFR AQQLGIPFRM PPAHPFNPIK ALRLTIAMGG SLDVVRAVFR HIWRDGNDVA
SPEGFAALCE AVGFAEGAAA VEQPAVKDAL RAHTDAAIAL GVFGVPTLVH EGELFWGEDA
TAMFLQSLRA GWLSTPEAQR VSTLPVGIQR G