Gene Rpic12D_4138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4138 
Symbol 
ID8021826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp737760 
End bp738464 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID644832918 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_002984058 
Protein GI241665699 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.60462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAC ACGATACAAA CTCGCGCCCC GGCATCAGCC GCGCACGGCT GGCGCATATC 
GCGGCGTGGT CGATTGATCT GCCCGCGGAA GAAGCCGACC GCGCCTGCGC CGGCATCGTT
GAAAAAACCT ACGCACGCGG CGCGTGCATC TGCCCGAAAA ACACGTTGCT GGAAAGCTGG
ACGGGCGTGG TCACGGGCCT CATCAAAATC GGCACGGTAT CGCCCGAGGG GCGCAGCGTC
ACGTTTACGG GCGTGCCTGC CGGCGGCTGG TTTGGCGAAG GCACGGTGCT CAAGAACGAG
CCGCGCCGCT ACGACATCGT TGCGCTGCGC GACACACGCA TGGCCTTCAT GGAGCGCGCC
ACCTTCATGT GGCTGGTGGA AAACAGCGTG GCGTTCAACC GCTTCCTGGT CAAGCAGCTC
AACGAGCGGC TCGGGCATTT CATGGCGCTG CTGGAATACG ACCGGCTGCT TGATGTCACG
CCGCGCCTGG CGCGTTGCAT TGCGTCGCTG TTCAACCCGG TTCTCTACCC CGGCGCGGGC
GACCACCTGG AGATCACGCA GGAAGAACTC GGCCTGCTTT CCGGCATGAC GCGCCAAGTT
GCCAACCAGT CGCTCAAGAC CCTGGAGAAG GACGGCGTGG TGCGGCTGGA ATACGGCGGC
GTGACGGTCG TGGACCTCGA TCGGCTGCGC AGCTACGGCG CCTGA
 
Protein sequence
MAEHDTNSRP GISRARLAHI AAWSIDLPAE EADRACAGIV EKTYARGACI CPKNTLLESW 
TGVVTGLIKI GTVSPEGRSV TFTGVPAGGW FGEGTVLKNE PRRYDIVALR DTRMAFMERA
TFMWLVENSV AFNRFLVKQL NERLGHFMAL LEYDRLLDVT PRLARCIASL FNPVLYPGAG
DHLEITQEEL GLLSGMTRQV ANQSLKTLEK DGVVRLEYGG VTVVDLDRLR SYGA