Gene Rpic12D_4134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4134 
Symbol 
ID8021822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp734151 
End bp734879 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content63% 
IMG OID644832915 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_002984055 
Protein GI241665696 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GCATCAAGCT CGGCATGCTC ACGCCATCAT CCAACACGGC GCTGGAACCC 
ATTACCAGCG CCATGGTGAG CGGCCTGCCC AACGTCAGCG CGCATTTCTC GCGCTTTACC
GTGACGGAAA TCTCGCTGCG CGACCAGGCG CTGGGGCAGT TCGACCTGGA AAATATCCTG
AACGCCGCCA AGCTGCTGGC CGATGCGCAC GTCGACGTGA TCGCCTGGAA CGGCACGTCG
TCCGGCTGGC TCGGCTTTGA GAAGGACGAG GCGCTGTGCC GCCAGATCAC GGAAGCCACC
GGCATTCCGG CCACCACCTC GGTGCTGGCG CTCAACGAGA TTCTGGCCAA GACCGGTGCA
CGCGATTTCG CCCTCGTGAC GCCGTACCTG GATGACGTGC AGCAGCGCAT CGTGCAGAAC
TACGCGCGCC ACGGTTTCAA GTGCGTGGCC GAGCGTCATC TGGACTTGCA CGTCAACCAC
AGCTTTGCCG ACGTGGAAGA AGACACGATC CGTACCCTGG TGCGCGAAGT GGCCCAGCAA
AAGCCGGCCG CCATCACCAC GTTCTGCACG AACCTGCGAG CCGCGCATCT GGTGGAAGCA
CTGGAAGCGG AAACGGGCAT CCCGGTGTAC GACACCATCT CGACCGTCGT GTGGAAATCG
CTGCGGCTGG CGGGTGTCGA CACGCGCGAG CTGCACGGCT GGGGCCGCCT GTTCGCGGAC
GTTGCTTAA
 
Protein sequence
MKKRIKLGML TPSSNTALEP ITSAMVSGLP NVSAHFSRFT VTEISLRDQA LGQFDLENIL 
NAAKLLADAH VDVIAWNGTS SGWLGFEKDE ALCRQITEAT GIPATTSVLA LNEILAKTGA
RDFALVTPYL DDVQQRIVQN YARHGFKCVA ERHLDLHVNH SFADVEEDTI RTLVREVAQQ
KPAAITTFCT NLRAAHLVEA LEAETGIPVY DTISTVVWKS LRLAGVDTRE LHGWGRLFAD
VA